Gossypium hirsutum (upland cotton): 107903936
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Entry
107903936 CDS
T04793
Name
(RefSeq) protein argonaute 7-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107903936
03036 Chromosome and associated proteins [BR:
ghi03036
]
107903936
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
107903936
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
107903936
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
107903936
microRNA pathway
RISC loading complex
107903936
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
DUF3734
Motif
Other DBs
NCBI-GeneID:
107903936
NCBI-ProteinID:
XP_016685650
UniProt:
A0A1U8J5M9
LinkDB
All DBs
Position
D05:35707800..35711740
Genome browser
AA seq
1015 aa
AA seq
DB search
MEETEEHHHVNKKCTTKTRTFKGGNNNPHKHHYQHPLLQYSSHFGLFNQNQFQSYSYYPA
LLPLPRPIPLQLALTPPLSQNQNFQTKTHLQKLPCKVNDFPPLATSSLPDTQVPVLTMTP
APEGLHGRTSFPYKGRKVRSSDTKEALVAARRPDSGGVEGPVITLLANHFVVKFDPSLKI
YHYNVEISPSPSKEVARMIKQKLVENNSGLLSGAHPAYDGRKNIYSPVEFQNDKLEFFIS
LPIPTTKSGLPFGELNCFPQKQNQLKVFRINIRHVSKFDGKDLRSYLSKEGDDWIPLPQD
YLHALDVVLREGPMEKCIPVGRSFYSSSMGGTKEIGGGAIGWRGFFQSLRPTQQGLALNV
DFSISAFHESIGVILYLQKRLDFLRDLSQRKTRSLSDEERKEVEKALRNIRVFVCHRETV
QRYRVNGLTEEATENLYFPDRGGKNLRLVDYFKDHYNYDIQFRNLPCLQISRSKPCYLPM
ELCMICEGQKFLGKLSDDQTARILKMGCQRPKERKAIIDGIMRGPVGPTSGNQAEEFKLQ
VSREMTRLNGRILQPPKLKLGDGGHIRDITPSRRDRQWNLLDSHVFQGTRIERWALISFG
GTPDQKSNIPKFINQLSQRCEQLGIFLNKSTIVSPQFESTQVLSNVYLLESKLKKIHRAA
SNNLQLLICVMEKKHKGYADLKRIAETSVGVVSQCCLYPNLGKLSSQFLANLALKINAKV
GGCTVALYNSLPSQIPRLLRLDEPVIFMGADVTHPHPLDDFSPSVAAVVGSMNWPAANKY
VSRMRSQTHRQEIIQDLAAMVGELLDDFYQEVNKLPKRIIFFRDGVSETQFYKVLKEELQ
AVKEACARFPGYKPPITFAVVQKRHHTRLFPFEIDPSSMQNLPFDENIPPGTVVDTVITH
PKEFDFYLCSHWGVKGTSRPTHYHVLWDENHFTSDELQKLVYNLCYTFVRCTKPVSLVPP
AYYAHLAAYRGRLYLERSESIACMRSSPTISRPAPPKATPLPTLSENIKKLMFYC
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaactgaagagcaccaccatgtgaacaagaaatgcactaccaaaaccaggact
ttcaagggcgggaataataatcctcataagcatcattaccagcacccattgttgcaatat
tcaagccactttgggttgtttaaccagaaccagttccaaagttactcttactaccctgct
ttgctccctttaccccgtccaatacctttgcagctggctttaaccccacctctctctcaa
aaccaaaactttcaaactaaaacccacttgcagaaacttccatgtaaggttaatgatttt
cctccacttgccacctcttccctccctgatacacaagtcccagttctaacaatgacacca
gctccagaggggcttcatgggagaacaagtttcccatataaaggaaggaaggtgaggagt
agtgatacaaaggaagcactggtggctgctaggagaccagattctggtggtgttgaaggg
ccagtaatcactctccttgccaaccattttgtagtgaaatttgacccctctcttaaaatt
taccattacaatgttgaaatatctcctagtccctccaaggaggttgctaggatgatcaaa
cagaaactggtggaaaacaactcaggtttactctcaggtgctcatccagcttatgatggt
agaaagaatatatacagccctgttgagttccaaaatgataagcttgagttctttattagt
ctcccaatacccaccaccaagtcaggcttaccttttggggaattgaattgcttcccacag
aagcagaatcagctcaaagtgtttcgaatcaatatccgacatgtttcaaagtttgatgga
aaggatttgagaagttacttgagcaaggaaggtgatgattggatcccactccctcaggat
tatctccatgctttggatgttgttcttagggagggtccaatggaaaagtgtataccggta
gggaggtcgttttattcgagttcgatgggaggtactaaggaaatcggagggggagctatt
ggatggagaggtttctttcagagccttcgaccaacgcaacaaggattagcgctcaatgtt
gatttctccatcagtgccttccatgagagtattggagttatcctttacttgcaaaagcgg
ctggactttctccgagacctttctcaaagaaagacaaggagtttgagcgatgaagagagg
aaagaagtggagaaggcattgagaaatatcagagttttcgtttgccatagagaaacggtt
caacggtaccgtgttaatggcttaactgaagaagctaccgaaaatctttacttccctgac
cggggtggtaagaatttgaggcttgttgattactttaaggatcactacaattatgacata
cagttcaggaacttgccatgcttgcaaatcagtaggagcaaaccatgctatcttcccatg
gaactttgtatgatttgtgaaggccaaaagtttcttgggaagctttcggatgatcagact
gcaaggatccttaaaatgggctgccagagaccgaaagaacgaaaagccataattgatgga
atcatgagaggaccagtagggcctacaagtggcaaccaggcagaagaattcaaactccaa
gtttcgagagaaatgactcggttgaacgggaggattcttcaacctcccaagctcaagctt
ggtgatggtggacacataagagatatcactccttcccgccgtgatcgccaatggaacctt
ttggacagccatgtatttcaaggaacgagaatagaacggtgggcacttataagttttggg
ggcacccctgatcaaaagtctaacatccccaaattcataaaccagctatctcaaaggtgt
gagcagctggggatctttcttaacaaaagcacaattgtcagccctcaatttgaatcaaca
caggtgcttagtaatgtgtatcttttggaatctaagctcaagaagatccacagagctgct
tccaacaatctccagctgctcatatgtgtaatggagaaaaagcacaaaggctatgcggat
ttgaaacgaatagcggagacaagtgtgggagttgtgagccagtgctgcttgtatccgaac
cttgggaaactcagttcacagtttcttgcaaatttggccctgaagatcaatgccaaagtt
ggaggttgcacagttgctttgtacaactcgttgccatctcagattccacgtcttctccgg
ctcgatgagcctgtgatctttatgggtgctgatgtgacacatcctcacccgcttgatgat
ttcagcccatcagttgccgccgtggttggtagcatgaactggcctgcagcaaacaagtat
gtatctagaatgaggtctcaaacgcatcgacaagaaattattcaggacctcgctgcaatg
gtaggggagttacttgatgacttctaccaggaagtaaacaaactgcccaaaagaatcatc
ttcttcagagacggtgtaagcgaaactcaattctacaaagtgcttaaagaggagctgcaa
gctgttaaagaagcttgtgcaagatttccgggttataaacctcccattactttcgcagta
gtacaaaagaggcatcacacaaggttgttcccatttgaaatcgatccttcttccatgcaa
aacctaccttttgatgaaaatattccccccggaaccgtagtggataccgtgataacacat
ccaaaggaattcgatttctatctttgcagtcattggggggtgaagggtactagccgcccg
actcattaccatgtgttgtgggatgaaaaccatttcacttctgacgaactgcagaagctg
gtttacaacctatgttacacgttcgtaagatgcaccaagcccgtgtctttggtgccgcct
gcgtactacgcgcacctggcagcatatagagggaggctttacctcgagcgatcagaatcc
attgcttgtatgagaagttctcccacaatttcacgtccagctcctccgaaggcaacacca
ttaccgacactaagcgagaatattaagaaactcatgttctactgctaa
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