Gossypium hirsutum (upland cotton): 107904028
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Entry
107904028 CDS
T04793
Name
(RefSeq) trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1-like
KO
K12450
UDP-glucose 4,6-dehydratase [EC:
4.2.1.76
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00541
Biosynthesis of various nucleotide sugars
ghi01100
Metabolic pathways
ghi01250
Biosynthesis of nucleotide sugars
Module
ghi_M01021
UDP-L-Rha biosynthesis, UDP-Glc => UDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
107904028
Enzymes [BR:
ghi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.76 UDP-glucose 4,6-dehydratase
107904028
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Gene cluster
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
adh_short
NmrA
NAD_binding_10
Motif
Other DBs
NCBI-GeneID:
107904028
NCBI-ProteinID:
NP_001313859
UniProt:
D2WK32
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Position
A04:complement(12138485..12141970)
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AA seq
667 aa
AA seq
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MATYTPKNILITGAAGFIASHVANRLVRNYPDYKIVVLDKLDYCSNLKNLLPSQSSRNFK
FVKGDIGSADLVNYLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV
TGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP
VITTRGNNVYGPNQFPEKLIPKFILLAMRGKVLPIHGDGTNVRSYLYCEDVAEAFEVILH
KGEVGHVYNVGTKKERRVIDVAKDICKLFSMDSETSIKFVENRPFNDQRYFLDDQKLKNL
GWSERTVWEDGLKKTIEWYTQNPDWWGDVSGALLPHPRMLMMPGGRQFDSEEGKDTSYIS
SPSQTQMVVPTSKSSVSSQKPALKFLIYGRTGWIGGLLGQLCDKQGIPFEYGKGRLEDRS
SLTADIRNIKPTHVFNAAGVTGRPNVDWCESHKTETIRTNVAGTLTLADVCREHGLLMMN
FATGCIFEYDAGHPQGSGIGFKEEDKPNFTGSFYSKTKAMVEELLKEYNNVCTLRVRMPI
SSDLNNPRNFITKISRYSKVVNIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHN
EILEMYKKYIDPKFQWANFTLEEQAKVIVAPRSNNEMDASKLKKEFPELLPIKESLIKYV
FEPNKRT
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggctacttataccccgaagaacatcctcataactggggctgctgggtttattgcgtcg
catgttgccaatcggcttgtccgcaactacccagactacaagattgttgtacttgacaag
cttgattactgctcaaatttgaaaaacctccttccttctcagtcatcgcggaactttaag
tttgtgaaaggggatattggtagtgctgaccttgtaaactacctcctcattactgaatct
attgacacaataatgcactttgcagcccaaactcatgttgataactcgtttgggaacagt
tttgagtttaccaagaacaatatctacggcactcatgtcctgcttgaagcttgcaaagtc
actggccagatcaggaggttcatccatgtaagcacggatgaggtttacggggagacagat
gaggatgctgttgtaggaaaccacgaggcttcccaacttctcccgacaaacccgtactct
gcaacaaaagctggtgctgaaatgcttgtaatggcatatggtagatcatatggattacct
gtgattacaacccgtggaaacaatgtttatggccccaaccagttcccagaaaagttgatt
cctaagtttatcctcttagcaatgagggggaaggttctcccaattcatggggatggtact
aatgtgaggagttatttatactgcgaggatgtggctgaggcatttgaggtcattcttcac
aagggtgaagttggtcatgtttataatgttggaacaaagaaggagaggagagtgattgat
gtagccaaagatatatgcaaacttttttcaatggactcggagacaagcatcaagtttgtt
gaaaacagaccatttaacgaccagaggtattttcttgatgatcagaaattgaagaacttg
ggatggtctgagcgaactgtgtgggaagatggcttgaagaagaccatagaatggtacact
caaaatcctgattggtggggcgatgtgtctggtgcactgcttccacacccgagaatgctg
atgatgcctggcgggagacaatttgattcagaagagggaaaagatacatcgtatataagt
tctcctagtcagacccaaatggtagttccgacctccaaaagtagtgtctcttctcaaaaa
ccagccttgaagttcttgatttatggcaggactggctggatcgggggtctactaggtcag
ttatgtgataagcaaggtattccctttgaatatggaaaaggaaggttggaagatcgttcg
tcacttacagcagatattcggaatataaaaccgacccatgtttttaatgctgctggtgtg
accggtagacccaatgttgattggtgtgaatcccacaaaacagaaacaattcgcactaat
gtggccggaaccttgaccttggctgatgtttgccgagagcatgggcttttgatgatgaac
tttgctactgggtgtatattcgagtatgatgcaggacatcctcagggctctggcattggt
tttaaagaggaagacaaacccaatttcaccggttccttctactcaaaaaccaaggctatg
gttgaagagttgctgaaagaatacaacaatgtctgcaccctcagagttcgaatgccaatc
tcatctgacctaaacaaccctcgcaacttcatcaccaagatttcaagatacagcaaggtg
gtcaacattcccaacagcatgacaatcttggacgaacttctaccgatttctatcgagatg
gcaaagaggaacttgacgggcatatggaacttcacgaaccctggcgttgtgagccacaat
gagatcctggagatgtacaagaagtacattgacccgaaattccagtgggcgaacttcaca
ttggaagaacaagccaaggtgatcgttgcccctcgaagcaataacgagatggacgcatcc
aagttgaaaaaagagttccctgagttgctaccgatcaaggaatcattgattaagtacgtc
ttcgaacccaacaaaagaacctga
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