KEGG   Gossypium hirsutum (upland cotton): 107904068
Entry
107904068         CDS       T04793                                 
Name
(RefSeq) cullin-3B
  KO
K03869  cullin 3
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    107904068
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ghi04121]
    107904068
   03400 DNA repair and recombination proteins [BR:ghi03400]
    107904068
Ubiquitin system [BR:ghi04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul3 complex
    Cullin
     107904068
DNA repair and recombination proteins [BR:ghi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     107904068
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 DNA_repr_REX1B Viral_NABP
Other DBs
NCBI-GeneID: 107904068
NCBI-ProteinID: XP_016685825
UniProt: A0A1U8J669
LinkDB
Position
D05:35394793..35399730
AA seq 732 aa
MSNQKKRIFQIEAFKNRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMV
LHKFGEKLYSGLVTTMTAHLKEISKSIEAAQGDLFLEELNRKWNDHNKALQMIRDMLMYM
DRTYIPNTHKTPVHELGLTLWRDNIIHSGKIQSRLLSTLLELVHRERTGEVIDRGLMRNI
VKMLMDLGSSVYQEDFEKPFLEVSAEFYRRESQKFIECYDCGDYLKKAEIRLNEEIERVT
HYLDAKSEGKITHVVEKEMIANHMMRLVHMENSGLVNMLLNDKHGDLGRMYNLFRRVPNG
LAMIRDVMTSHLRETGKQLVTDAERLKDPVEYVQRLLDEKEKYDGIISLAFSNDKTFQNA
LNSSFEYFINLNSRSPEFISLFVDDKLRKGLKGVSEEDVEIILDKVMMIFCYLQEKDVFE
KYYKQHLAKRLLSGKTVSDDAERSLIVKLKTACGYQYTSKLEGMFTDMKTFQDTMQGFCS
SHPELTDGPTLVVQVLTTGSWPTQPSITCHLPFEMSALCEKFRSYYLGIHTGRRLSWQTN
MGTADIKAIFGKGQKHELNVSTYQMCILMLFNNADRLSYKEIEQVTAIPASDLKRCLQSM
ACVKGKNVLRKEPMSKDIGEDDSFFVNEKFASKFYKVKVGTVVAQKESEPEKQETRQRVE
EDRKPQIEAAVVRIMKSRKVLDHNNIIAEVTKQLQSRFLANPSEIKKRIESLIEREFLER
DNSDRKMYRYLA
NT seq 2199 nt   +upstreamnt  +downstreamnt
atgagtaatcaaaagaaaaggatcttccaaatagaagcattcaagaaccgggtcgtggtg
gatccgaaatatgcagaaaagacctggaaaattctcgaacatgcaatccatgagatttac
aaccataacgctagtggcctcagttttgaagagctttacaggaatgcatacaatatggtt
ttgcacaaatttggtgagaagctgtactcaggactcgttacaactatgactgcacacctc
aaagaaatatcaaaatctatagaggctgctcaaggtgatttatttctcgaagagctgaac
aggaaatggaatgaccataacaaggccttgcaaatgattcgagacatgttgatgtacatg
gacaggacttatattccaaatacccataaaacccctgtccatgagctgggacttaccttg
tggagggataacattatacattctggcaaaattcagtcgaggcttctgagcacacttctt
gaactggtgcatagagagcgaactggggaagttatagaccgggggctgatgaggaacata
gtcaagatgcttatggatttgggttcttctgtttaccaggaggattttgagaagccattt
cttgaggtttctgctgagttttacaggcgcgaatctcagaaatttattgagtgctatgat
tgtggggactatctaaagaaagcagagatacgtctaaatgaagaaattgagagagttacc
cactacttggatgccaagagtgaaggcaagataactcatgtggtggagaaggaaatgatt
gctaaccacatgatgagattagtccacatggagaactccggcttggtaaatatgcttctt
aatgacaagcatggtgacttgggtagaatgtacaatttatttagaagagttcctaatggt
cttgcaatgatacgagatgtgatgacatcacaccttagagaaacgggtaaacaactagtt
actgatgcagaaaggttgaaagatcctgtggagtatgtccaacggctcttggatgaaaag
gaaaaatatgatggtatcattagcctagcatttagcaatgacaagacattccagaacgct
ctcaactcctcatttgaatatttcattaatttgaattctcgttcccctgagttcatttca
ttatttgtggatgataagcttcgtaaaggtttgaaaggagtcagtgaggaggatgtggag
ataattcttgacaaagttatgatgatcttctgctatctgcaggagaaggatgtgtttgag
aaatactataagcagcacctagctaagcggcttttgtcaggcaaaactgtatctgatgat
gcagaaagaagtctgatagtcaagcttaagacagcatgtggatatcaatatacttcaaag
ttagaaggcatgtttacagacatgaagaccttccaagacacaatgcaagggttttgctct
agccaccctgagctcacagatggccctaccctagttgttcaggttctaacaacggggtct
tggcccactcagcctagtattacttgccacctaccctttgagatgtcagcattgtgtgag
aagtttcggtcatattatcttggaatccatactggtcgaagattatcctggcaaactaac
atggggacagcagatataaaagcaatttttgggaagggtcagaagcatgagttaaatgtt
tcaacttaccaaatgtgtatattgatgctttttaataatgctgataggcttagctacaag
gaaattgaacaagtcactgcgattcctgcttcagacttgaaaagatgcttgcaatcaatg
gcatgtgtgaagggaaagaatgttcttaggaaagaacctatgagtaaagatattggcgag
gatgattcattttttgttaatgaaaagtttgcaagcaaattttacaaggtgaaggtagga
actgtggttgcacaaaaggagtcagaacctgaaaagcaggagacccgacaaagagtggag
gaggacaggaagccgcagattgaagctgcagtagttaggatcatgaagtcaaggaaggtg
ctagatcacaacaatataatagctgaggttacaaaacagttgcagtcacggttccttgcg
aacccatcggagataaagaaacggatagagtctctaatcgagcgggaattcttggaaagg
gacaatagtgataggaaaatgtataggtatctagcctaa

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