Gossypium hirsutum (upland cotton): 107904127
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Entry
107904127 CDS
T04793
Name
(RefSeq) AP3-complex subunit beta-A isoform X1
KO
K12397
AP-3 complex subunit beta
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
107904127
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107904127
Membrane trafficking [BR:
ghi04131
]
Endosome - Lysosome transport
Others
AP-3 complex
107904127
Endosome - Golgi transport
107904127
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
AP3B1_C
AP3B1_C_2
HEAT_2
INTS1_R4
Svf1_C
Motif
Other DBs
NCBI-GeneID:
107904127
NCBI-ProteinID:
XP_016685890
UniProt:
A0A1U8J6D8
LinkDB
All DBs
Position
D05:complement(33701271..33710365)
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AA seq
1135 aa
AA seq
DB search
MFPQFGATAETLSKASTMVFRIGTDAHLYDDPDDVSIAPLLDSKFDSEKCEALKRLLALI
AQGFDVSNYFPQVVKNVASQSLEVKKLVYLYLLHYAEKRPNEALLSINCFQKDLGDPNPL
VRAWALRTMAGIRLHVIAPLVLVAVGKCARDPSVYVRKCAASALPKVHDLSLEEHTSAIE
EIVGMLLNDRSPAVVGAAAAAFASVCPYNLSLVGRNYRKLCEILPDVEEWGQIVLIGILL
RYVIARHGLVKESIMYSLQCTESSHSAKDGSDVDSGLVKESTDLSGTCDSEFVNTVSRCY
MEGPDEYLSRSSCANRESFELNGAQFTSGKSNDDVKILLYSTSPLLWSNNSAVVLAAAGV
HWVMAPKEDVKRIIKPILYLLRSSNASKYVVLRNIQVFAKAMPSLFAPYFEDFFIFSSES
YQIKALKLEILSYIATDSSISSIFKEFQDYIRDPDRRFAADTVAVIGLCVQRLPKMAHIC
VDGLLALTRQEFVTEDFGFEDQEAGILTQVIMSIKSIIKQDPPSHEKVIIQLVRRLDSVK
VPAARAMIIWMVGEYSSLGEIIPRMLTTVLKYLAWGFPSEAPETKLQILNTVCKVLEGAT
GDDLWTFKKIFSYLIELAECDLNYDLRDRARLLKKLPSCNLVSLGLEEETNDLPENDLLH
IVAECILGRQTRKVKPESFSYRYYLPGSLSQIVLHAAPGYEPLPRPCSLLLDDLNVAEGT
SEMKRAADYSGTDDYGSSSDPSDEESASDYGSQRSVTESSGSDRGDDSEFTSEGNYNADP
LIQISDIGNASENQNGVSQSSPANLGELMSNKALESWLDEQPGSSNPGLPKQSQVRISSA
RISVGDVGKRVKQKSYSLLDPASGNGLKVDYSFSSEISSISRLLVCIEVFFKNCSSEIIS
EITLVDEESNRAFDSADKTAVVNESSLTSSDDVPTLVPMESIVSLEPGQTTRRILQVRFH
HHLLPLKLALYCDGKKLPIKLRPDIGYFVKPLPMDVEVFIDKESRLPGMFEYARSCTFTD
HIVELNKENGDSLLVKDKFLAICESLALKMLSNANLCIVSVDMPIATNLDDASGLRLRFS
SEILSSSIPCLITLGVEGKCTDPLNLSIKVNCEETVFGLNLLNRIANFLVEPALS
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgtttccacagttcggagcgacggcggagacgttgagcaaggcatcgacgatggtgttc
cggatcggaaccgatgctcacctctacgacgatccggatgatgtcagcatagctccgctt
ttagatagtaaattcgattcggagaagtgtgaggctctcaagcgactcctcgctctcatc
gctcaaggcttcgacgtctccaattacttccctcaggttgttaaaaacgtggcatctcaa
tctttggaagtaaagaaacttgtttatttgtatctactgcattatgctgaaaagcgtccc
aacgaagcattgttgtcaattaattgtttccagaaggatttgggggaccctaatcccttg
gtgagagcatgggcacttcgcaccatggctggaattcgtcttcatgttattgcacctctt
gttctggtggctgtgggcaagtgtgctagagatccatctgtctatgttagaaaatgtgca
gctagtgctcttccaaaagtacatgatttgagcctagaggaacatacctcggcaattgaa
gagattgttgggatgttgttaaatgaccgctcccctgccgtagttggtgctgctgctgct
gcatttgcttctgtttgtccatataatttatctttggttgggaggaattatagaaagtta
tgtgagattcttcctgatgtggaagagtggggtcagatagtcttgattggaattctttta
cgctatgttattgcaaggcatgggctagtgaaagaatccattatgtattctctgcaatgt
actgagagctcacattctgcaaaagatggttcagatgttgactctggactagtaaaggaa
tccactgacttgagtgggacatgtgattctgaatttgtaaacacagtttccaggtgctat
atggagggtccggatgaatatttatctaggtcaagttgtgccaacagggagtcttttgaa
ttaaatggtgcacaatttacatctggaaaaagtaatgatgatgtcaagatcctgctttat
tctacatctcccctgttatggagtaacaacagtgctgtggtactagcagctgctggtgta
cactgggttatggcaccaaaggaggatgttaagagaatcattaaaccaatcttgtatttg
ctgaggtcctctaatgcctcaaaatatgtggttctacgcaacattcaagtgtttgctaaa
gcaatgccttctctctttgctccatactttgaggacttcttcattttctcttctgaatca
tatcaaatcaaagccttgaagcttgagatactttcttacattgctacagattcgtccatt
tcttctattttcaaagagtttcaggattatattagagatccagacaggcgattcgctgct
gatacagttgctgtaattggtctatgtgtgcaacggcttccaaaaatggcacatatatgt
gtagatgggctgttggctctgactagacaggagttcgtgactgaagattttgggtttgaa
gatcaagaagcgggtattttgactcaggttattatgtctataaaatcaatcataaagcaa
gacccaccaagtcatgagaaggttataattcagttggtccgccgtttggattcagtcaag
gtgcctgcagctcgtgcaatgattatttggatggttggagaatatagctctttgggtgag
ataattcctaggatgttaaccacggtgctgaagtatcttgcatggggttttccttcagaa
gcaccagaaacaaagcttcaaattcttaacacagtgtgtaaggttctagaaggtgcaaca
ggagacgatctgtggacatttaagaaaatattcagctatttgattgaattggctgaatgt
gatttgaactatgatcttcgtgaccgagctcgtttattgaagaaacttccatcatgcaac
ttagtctctctaggactggaggaagaaacaaatgatcttcctgaaaacgaccttctgcat
atagttgctgagtgcatattaggaagacaaacaagaaaagtgaaacctgaatcatttagt
taccggtattatctacctgggtctctctcgcagatagttcttcatgcagctccagggtat
gagcctctcccaaggccttgtagtttgctccttgatgacctcaatgtggctgaaggaacg
agtgaaatgaaaagggcggctgattacagtgggacagatgattatggctcatcatcagat
ccttcagatgaggaaagtgcttctgattatggttctcagcgctcagtcactgaatctagt
ggcagtgaccgtggtgatgacagtgaatttactagtgaaggaaattataatgcagatcca
ttgattcagatttcagacatcggcaatgcttctgaaaatcagaatggagtttctcagtct
tctcctgctaatctgggggaattgatgtcgaataaagctctggagtcatggttggacgaa
cagcctggttcatcgaacccaggcctgccaaaacaaagtcaagtccgtatatcatcagca
agaatatctgttggggatgttggaaagcgggttaaacaaaaaagttattcactgttagac
cctgcaagtggaaatggtttgaaggtggattattctttttcatcagaaatatcaagtata
tcccgtctacttgtatgcatagaagttttctttaagaactgttcatcagagattatatca
gaaataaccttggttgatgaggaatctaacagagccttcgattctgctgacaagactgct
gttgtaaatgagagctccttgacatcctctgatgatgtgccaacactagttccgatggag
tcgattgtttctttagaacctggtcagacgacaagaaggattcttcaagttcgctttcat
caccatctattgcctttgaagctagctttatattgtgatgggaagaagcttccaattaag
ttgcggcctgatattggatattttgtaaaacccttaccaatggatgttgaagtcttcatc
gataaagaatctcgtctcccagggatgtttgaatatgcaaggagttgcactttcactgac
cacattgtggagctaaacaaggagaatggggatagcttgttagtcaaagacaaatttctt
gcaatttgtgagagcttagcactaaaaatgcttagcaatgcaaatctttgtatcgtatct
gtcgatatgcccattgctactaacctagacgatgcatcgggtttgcgcttacggtttagc
tctgaaatcttgagtagttcgattccttgtttaattacccttggtgttgaaggtaagtgc
actgatccattaaacttatccattaaagtaaactgtgaagaaactgttttcggcctaaat
ctgttgaacagaatagcaaatttcttagttgagcctgccctttcttaa
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