Gossypium hirsutum (upland cotton): 107904133
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Entry
107904133 CDS
T04793
Name
(RefSeq) protein NEDD1 isoform X1
KO
K16547
protein NEDD1
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ghi03036
]
107904133
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ghi04812
]
107904133
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Other PCM proteins
107904133
Microtubules and associated factors
gamma-tubulin ring complex
107904133
Cytoskeleton proteins [BR:
ghi04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
107904133
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
WD40_WDHD1_1st
WD40
WDR55
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR3_2nd
Beta-prop_EIPR1
Beta-prop_EML
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_1st
WD40_RFWD3
WD40_Gbeta
Beta-prop_IFT140_1st
EIF3I
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
Beta-prop_SCAP
Beta-prop_WDR35_TULP_N
Beta-prop_WDR11_1st
Beta-prop_Aladin
NBCH_WD40
Beta-prop_IFT122_1st
NYD-SP28_assoc
Beta-prop_VPS8
PAN2_N
bZIP_2
YabA
Motif
Other DBs
NCBI-GeneID:
107904133
NCBI-ProteinID:
XP_016685898
UniProt:
A0A1U8JCE2
LinkDB
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Position
D05:complement(33858557..33863909)
Genome browser
AA seq
819 aa
AA seq
DB search
MMNRPYPSLELLAASGGDTVKIFDIKLEPNDPCVLSYSPSPSCFVNSVRWNHTNLVVASA
GEDKKISLWRKNGQRMWTVPVAGTDCGDNIEIFNCRYVHDEIEVTYEMRILCLLAVNSDE
SILAISFSNKGSRYICSGGSSQVVRIWDLQRKRCIKWLRGHTSTITGVMYNCKDEHLASI
SQSGDLILHNLASGARAAELKDPNEQVLSVLDYSRISRHILVAAGDDGSIHLWDTTGRSP
KVSWLKQHSAPTTGISFSPSNDKIIATVGLDKKLYTYDTGSRRPSAFISHEAPFTSLAFR
DDGWTLAAGTNNGRVAFYDLRGKLQPFTVLRAYSSSEAVSSLCWQRSKPVIVNESTCAAE
TALLGGPVEDSVLMPDPLPSVTSSSLSVSTAISGGRSGPAEVSFLTSSSESVSSTGNLSS
SMETPHRSHLWPGGTLTRLHAPHSKYNLKDDMDVFSPVVDVQPITPSLDKLWDIHEGAKK
DHLLADKRPSSLLFPSSRRFAFADDGAGDHPIFDWKSSSMYQQDDKRSLTSLGSMPTPSS
KSEEASITPPEAWGGDKISDKFAHLRHLPSRFGMEASGGLTTSSTYSGQTQSSMLSQTSI
SSLTSYDISYENLRTKDVSSSQETSLGFPEHLSSSMSALSLGSKGITGAGSLDSPKLASL
GLPRRFSTYAERISTTSAFSDGTSQLVVSPKTKKTGAETREELLNSLLLRSDSFTGAESG
ILPAMNGGTQLHKAPQPDPQQGSNFTLQLFQRTLEETLDSFQKSIHGDMRNLHIEILRQF
HMQEMEMSRVMSSILQNQAELMEEVKSLRKENQQLRQLL
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatcgaccgtatccgtcgctggagttactagcggcgagcggcggcgacaccgtg
aaaatcttcgacattaagctcgaaccgaacgatccttgcgttttaagttactcaccttct
ccgagttgctttgtcaattcggttaggtggaaccacactaacttagtggtagcgagtgcc
ggagaagataagaagatatctttgtggcggaaaaatgggcagaggatgtggacagttccg
gttgctgggactgattgtggagataacattgagatttttaactgcagatatgtacatgat
gaaatagaagttacctatgagatgcgcatcctttgtttattggctgtcaactcagatgag
tctattttagctattagctttagcaacaaggggtccagatacatatgttcagggggaagt
agtcaagttgtacggatatgggatttgcaaaggaagcgttgcatcaaatggttaaggggt
cataccagcacaattacaggtgttatgtacaattgcaaagatgagcacttggcctccatc
agccaaagtggggatctcattcttcataaccttgcttctggggcaagggctgctgaacta
aaagatcctaatgaacaggtactgagtgtacttgattattctcggatcagccgacacatt
ttggtggctgctggtgacgatggatctatccatttatgggataccaccggtcgtagccca
aaggtttcctggttgaagcagcactctgcacccacaactggcattagcttctcaccatcc
aatgataagataattgctactgttgggttggataagaagctatacacctatgatactggg
tctagaagaccctctgctttcatttctcatgaggcacctttcacttcattggcatttaga
gatgatggttggacactggcagctggcaccaataacggtagagtagcgttctatgatctt
cggggaaaactacagccttttactgtcctacgcgcttatagcagttctgaggctgtttca
agtttatgctggcaaagatcaaaaccagtaattgttaatgagagtacttgcgctgctgag
actgctctcttggggggtccggtggaggattctgttcttatgcctgacccacttccatct
gtgacatcatcgagcctttcagtatccacagcaatttctggtggccgatcaggccctgca
gaagtatcttttcttactagtagtagtgaatcagtgtcaagcacaggcaatctgtcttct
tctatggaaactccacatagaagccatctgtggcctggtggaacactgacgagattacat
gctcctcactctaagtacaatctcaaggatgatatggatgtgttttcccctgttgtggat
gttcaaccgattacaccctcactcgataagttgtgggatattcatgagggtgcaaagaaa
gaccatctactcgctgataagaggccttcctcccttctgtttccctctagcaggaggttt
gcttttgctgatgatggagctggggatcacccaatatttgattggaagtccagttcaatg
tatcaacaggatgacaaaagatctttgacgtcattaggatctatgcctacaccatcatcc
aagagtgaagaggcctccatcactcctcctgaagcgtggggtggtgataagatatctgat
aaatttgctcacctccgccatctgccatctcgatttgggatggaggcttctggtggtctg
acaacaagctctacttattctggacaaactcaatcttcaatgctcagtcagacaagtatt
agctcattaacaagttatgacataagctatgaaaacttgcgcacaaaagatgtctcttca
agtcaggagacgtcattaggatttcctgaacatttatccagctccatgtctgctttgtct
cttggttcaaaaggcattactggagcaggcagccttgactcaccaaaactagcatcttta
gggctgcctcgaaggttttcaacatacgctgagagaattagtactacatctgccttcagt
gacggaacttcccaattggtggtttcccccaaaacaaagaaaacaggagctgagaccaga
gaagagctgttaaatagcttgttattgaggtctgattcatttactggagcagaatcagga
attcttccagctatgaatggaggaacacaactccacaaggctcctcaacctgatccccag
caaggaagcaacttcactcttcagctatttcaacgtactcttgaagaaacccttgattca
tttcagaaatccattcatggagatatgaggaaccttcatattgaaatcttaagacaattc
cacatgcaggagatggagatgtctcgtgtgatgagctccattctacagaaccaagctgaa
ctgatggaagaggttaagtctctccggaaagaaaaccagcagcttcgtcaattgctttga
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