Gossypium hirsutum (upland cotton): 107904253
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Entry
107904253 CDS
T04793
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
107904253
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ghi04040
]
107904253
Ion channels [BR:
ghi04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
107904253
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Motif
Pfam:
Ion_trans
cNMP_binding
IQ
Motif
Other DBs
NCBI-GeneID:
107904253
NCBI-ProteinID:
XP_016686050
UniProt:
A0A1U8J6T0
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Position
A05:110769922..110776741
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AA seq
636 aa
AA seq
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MNYPPEKVVRFQDWNSEKTCEGQYANINGINSGKFTFAINSFSGKFQRGVESGSERIKAI
RKSFKSSSFNHVVAKGFGSSKKVLDPQGPFLQRWNKIFVLSCIIAVSIDPLFFYVPVVND
DKKCLALDEKMETTACVLRSFTDIFYIIHIIFQFRTGFIAPSSRVFGRGVLVEDSQAIAK
RYLRSYFLIDVLAVLPLPQLVILIIIPEMSGLKSLNTKNLLKIVVLFQYLPRVFRIYPLY
KEVTRTSGILTETAWAGAAFNLFLYMLASHVFGASWYLFSVEREFTCWKGACGNNTTCHR
SFYCDNVFISISGLVLFSFLIGNMQTYLQSTTTRLEEMRVKRRDAEQWMSHRFLPENLRE
RIRRYEQYRWQETRGVDEENLLRNLPKDLRRDIKRHLCLALLMRVPMFEKMDEQLLDAMC
DRLKPVLYTEESYIVREGDPVDEMLFIMRGKLLTVTTNGGRTGFFNSEYLGAGDFCGEEL
LTWALDPHSSSNLPISTRTVRALTEVEAFALMADDLKFVASQFRRLHSKQLRHTFRFYSL
QWRTWAACFIQAAWRRYSKRKLEESLREEENRLQDALANAGGSSPSLGATIYASRFAANA
LRALRRNRSRKARVTERVPPLLLQKPAEPDFTAEEQ
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgaattatccaccagagaaggttgtgaggttccaggactggaattcggagaaaacctgc
gaaggacaatatgctaatattaatgggataaattcagggaaatttacatttgcaataaat
tcattttcaggaaagtttcaaagaggggttgaatctggttctgagaggattaaagcgatc
agaaagtcatttaaatctagttcattcaaccatgttgttgctaaaggctttggttctagt
aagaaagttcttgatccacaggggccattccttcaacgctggaacaagatatttgtatta
tcatgtataatagcagtctcaattgatccactgttcttttacgttccagtggttaatgat
gacaagaagtgccttgccttggatgaaaagatggagaccactgcttgtgtgctgcgttca
ttcacggatatcttctatataatccatatcatttttcagtttcgtactggattcattgca
ccttcttctcgtgtatttggaagaggtgttttagttgaagattcacaggcaatagcaaag
aggtatctgcggtcatactttttaattgacgttctagcagttcttcccctaccacagctg
gtgattttaattatcatacctgaaatgagtggtttgaagtcattgaatacgaagaacttg
ttgaaaattgttgttctcttccaatatcttccaagagtttttcgaatttatccactgtac
aaggaagttacaaggacctctggcatactaactgaaactgcatgggctggtgctgcattc
aatctgtttctttacatgctagcaagccatgtttttggggcttcttggtacttgttttct
gttgaaagggagttcacatgctggaaaggtgcctgtgggaataatactacatgccaccgc
tcattttactgtgacaatgttttcatttcgatctcaggcttggttctcttttcatttctc
attgggaatatgcagacatatttgcagtccacaactaccagattggaggagatgagagtg
aaaagacgtgatgcagaacaatggatgtcccatcgctttctacctgagaatctgagggag
cggattagacgatacgagcaatacaggtggcaagaaactagaggagttgatgaagagaat
ttacttcgtaatctccccaaggacttaagaagggacataaagcgccatctttgcttggct
ctgctcatgagagtgccaatgtttgagaaaatggatgagcaattactggatgcaatgtgt
gaccgtctcaagccagttctctacacagaggagagctacattgttcgggagggagaccca
gttgatgagatgctcttcatcatgcggggcaaactattgacagtgacaacaaatggtgga
agaactggcttctttaattctgaatatctgggggcaggagacttctgtggagaggaactt
cttacatgggctctagatcctcattcttcatcgaacctccctatctcaacaagaactgtc
cgggcccttacagaagttgaagcttttgctctgatggctgatgacttaaagtttgttgct
tctcagttccgtcggcttcatagtaagcagctgcgccacactttcaggttctattcactg
cagtggcgaacttgggctgcttgttttatacaagctgcttggcgtcgttatagcaaaagg
aaactagaggaatctttgagagaagaggagaatagattgcaagatgctttagccaatgct
ggtgggagctcaccaagtctgggtgccactatttacgcctcacggtttgctgccaatgcg
cttcgtgctttacggcgaaaccgttctcgtaaggcaagagtaacagagagggtaccgcct
ctgctgcttcagaagccagcagagcctgattttactgctgaagaacagtaa
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