Gossypium hirsutum (upland cotton): 107904311
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Entry
107904311 CDS
T04793
Name
(RefSeq) glucan endo-1,3-beta-glucosidase 6
KO
K19893
glucan endo-1,3-beta-glucosidase 5/6 [EC:
3.2.1.39
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00500
Starch and sucrose metabolism
ghi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
107904311
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ghi00537
]
107904311
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.39 glucan endo-1,3-beta-D-glucosidase
107904311
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ghi00537
]
Enzymes
107904311
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_17
X8
Motif
Other DBs
NCBI-GeneID:
107904311
NCBI-ProteinID:
XP_040970539
LinkDB
All DBs
Position
A05:complement(110161086..110166686)
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AA seq
484 aa
AA seq
DB search
MGWVTVAYRVNIGLVCLFMMLWSVSGIGVNWGTQASHPLPPDTIVRLLRDNGFQRVKLFD
ADYDTLKTLGKTGIEVMVGIPNDMLAIVGGSMKAAEKWVAKNVTQHITSNNVNIRYVAVG
NEPFLETYNGSYLGITFPALRNIQSALVKAGHNNQVKVTVPLNADVYESTNGSPSGGDFR
ADIHDIMLTIVNFLSLSAAPFTVNIYPFISLYSDPNFPVEYAFFDGNASPVSDGGTLYYN
MFDANLDTLAHALQKNGFADLPIIVGEIGWPTDGDRNANTEYARRFNQGFMSHISGGRGT
PMRPGPIDAYLFSLIDEDAKSIAPGNFERHWGIFTFDGQAKYPLNLGTTNSGALIPAKGV
QYLEKKWCVMKPSARLDDPQVEPSVSFACGSADCTCLGYGTSCGNLDARGNISYAFNSYF
QKNNQLEEACKFPNVSMITKTDPTPTGGNCKFHTMIQPYYGSAGWYGQKPLGLTSVLLVF
SLVL
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggggtgggttacagtagcatatagagttaatattgggttagtatgtttgtttatgatg
ttgtggagtgtgagtggaattggtgtgaactggggaacccaggcatcccaccctctgccc
ccagacactatagtaaggttgctgagagataatgggtttcaaagagtgaagctgtttgat
gcagattatgatacactcaagacactgggtaagactgggattgaggtaatggtgggaatc
ccaaatgacatgcttgctattgtgggtggcagcatgaaggctgctgagaaatgggttgcg
aaaaatgtcacccaacatataacttccaataatgtcaacatcagatatgtagctgttggt
aatgaacctttcttggagacatataatggaagctaccttggaataaccttccctgctctt
cggaacatccagtctgcgctggtcaaagctgggcataacaaccaagtaaaagtcactgtt
cccctcaatgctgatgtttatgaaagtacaaatggctctccgtctggtggggacttccgt
gctgacatccatgacatcatgcttacaattgtcaacttcttgagtcttagtgctgcaccc
ttcactgtgaacatctatccttttataagcctctattctgatcccaacttcccagttgag
tatgcattctttgatggcaatgcatcgccagtaagtgatggtgggacattatattacaac
atgtttgacgctaaccttgatacccttgcacatgcattacaaaaaaatggatttgcagat
ttgcccattatagttggtgagattgggtggcccactgatggagaccgaaatgctaacaca
gagtatgctcggcggttcaatcaaggttttatgtctcatatttcaggtgggagaggaacc
ccgatgagacctggcccaatagatgcatatttatttagcttgattgatgaggatgctaaa
agcattgctccaggaaattttgaacgccactgggggatctttacatttgatgggcaggcc
aaataccctctgaaccttggtactacgaactcaggagctttaattcctgcaaaaggtgta
caatacttggagaagaagtggtgtgtgatgaagccttcagccaggcttgatgatccacaa
gtagaaccaagtgtaagcttcgcatgtggttctgccgactgcacttgccttggttacggg
acatcttgcggaaatcttgatgctagggggaacatttcttatgcctttaacagttacttt
cagaagaataaccagctcgaagaagcctgcaaatttccgaatgtttcgatgatcacaaaa
acagatcccactccaacaggtggaaattgcaaatttcatacaatgatccagccctattat
ggatctgcaggatggtacgggcagaagccattaggattgacttctgttcttctcgttttc
tcgttggttctgtga
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