Gossypium hirsutum (upland cotton): 107904399
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Entry
107904399 CDS
T04793
Name
(RefSeq) retinoblastoma-related protein isoform X1
KO
K04681
retinoblastoma-like protein 1
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ghi03000
]
107904399
Transcription factors [BR:
ghi03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
107904399
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
Rb_C
LRR19-TM
EAD9
Motif
Other DBs
NCBI-GeneID:
107904399
NCBI-ProteinID:
XP_040968211
UniProt:
A0A1U8J7C4
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All DBs
Position
A05:complement(34105671..34112769)
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AA seq
1006 aa
AA seq
DB search
MDGDAFEARFTDLCKKGLSSDEKTCLGAMKLFKETKHLVSSNVSSAERTVEEAERFWFSF
VLYSLNRLSEKDGDSAQQKSDENRFTLCQILRATKLNIVYFFEELRQFVVKAGLVLTNMY
GEDWESRLEAKEMQANFEHLTLISKSYKRAFWELFLSSDANIGKQESATSAPDYLSKYHR
FGWLLFLALRVHAFSRFADLVTCANGFVSVLAILILHVPICYRNFKINDSPRFVKKGEKG
VDLLASLCNMYDASEAELRRTLKMTNKLMEDILKKKPCPAFECKTETLEHIDTDGLVYFE
GLLEEQSFLSNLSILENNYNNATRNRGDLDERLFINEEDSLLVFGSLSGEDVNISGIKRK
FDSIASPSKTITSPLSPHCHRASHVNGVLGPLNGKVASTPVSTAMTTAKWLRTFICPLPS
RPSAELQHFLSSCDKDVTNDVIRRAHIILEAIFPCSHDCSLTGSLRSANLMDDTWMEQRR
LETLKLYYRVLEAMCTAEAQILRAPNLTPLLTNERFHRCMLACSAELVLATHKTATMLFP
TVLGRTGITAFDLSKVIESFIRHEKSLPRELKRHLNSLEERLLESMVWDKGSSLYNTLIV
ARPALSSEINRLGLLAEPMPSLDAIAMHINFSGGIPTVPSLQKHETSPSNFGSLILGQNG
DVRSPKRQCTDYRSVLVERNSFTSPAKDRLLAFSDLRKAPLQSVFASPTRPNPVGGGETC
AETGINIFFSKINKLAAVWINGMVERLQLSQEIRESVYFLFQQILSQRTSLFFNHHIDQI
ILCCLYVVAKLSQLELPFKEITRNYRKQLQGRPEVYCSVFVDRSSTQQNGRTRQDHVGIV
AFYNTKFIPAIKYLLEELDLSRTTTRTTQVPESNNSNDGPCPGSPKVASFPSLPDMSPMK
VSAKHNVYVSPLRASKMDALISHSARSYYACVGESTRAFQSPSKDLTAINNQLNSTRNIR
IKLKFDDLEGGLVSDSMVANSLYLQSWSHTLASSPGAALKSEQPES
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atggatggcgatgcttttgaagctagattcactgatttgtgcaagaaagggttatcttcg
gatgagaaaacttgcttaggagctatgaagctattcaaagaaaccaaacatcttgtttca
tctaatgtttcatcagctgagaggacggttgaagaagcagagcggttttggttttcattt
gtcttgtattcgctgaaccgcctaagtgaaaaagatggagacagtgcacaacaaaaatct
gatgaaaataggtttacgttatgccagatattgagagctacaaagctaaatatagtgtat
ttctttgaagagttgcgtcaatttgtagtaaaagctggtcttgtattgactaacatgtat
ggtgaagattgggagagtagacttgaggcaaaggagatgcaggccaattttgagcacttg
acccttataagcaagtcatacaagcgtgcattttgggaactcttcttgtcaagtgatgca
aatattggaaaacaggaaagtgctactagtgctcctgattatttgtcgaagtaccatcgt
tttgggtggttactgtttttggcactccgtgtacatgcattcagccgttttgcagaccta
gtgacttgcgcaaatggttttgtttctgtactggctattctcattttacatgttcctatt
tgctacagaaacttcaagatcaatgactctccacgctttgttaagaaaggtgaaaaaggt
gttgacttgcttgcatcactttgcaacatgtatgatgcttcagaagctgagttgaggaga
acactgaagatgaccaataagttgatggaagatatattgaaaaaaaagccatgtccagca
ttcgagtgcaaaactgaaacactggaacatattgatacagatggcttggtctattttgaa
ggtttactggaggaacaatcttttttatccaatttgagcattttagaaaataattacaat
aatgcaactcgtaatagaggtgatctggacgagaggctgttcataaatgaagaagatagt
ttacttgtttttgggagcttgtctggagaggatgtgaatatttctggcattaagaggaag
tttgattcaatagcttcaccatcaaagacaatcacaagcccactgtctcctcattgtcat
cgtgcatctcacgtaaatggtgtccttgggccacttaacggaaaggtggcctctactcct
gtcagcactgcaatgacaactgcaaagtggcttcgtacttttatttgtccgcttccttca
agaccttcagcagagttacagcattttttatcatcctgtgataaagatgttaccaatgat
gtgatacgtagggctcatataatattggaggccatatttccctgtagtcatgattgtagt
ctaactggaagccttcgaagtgcaaacctaatggatgatacatggatggaacaacgaaga
ctggaaacacttaagttatactatagggttctggaagctatgtgtacagcagaggctcaa
atattacgtgcacctaacttgacccctttgttaactaatgagagatttcacagatgtatg
cttgcttgttctgctgaactagtgctagcaacacataagactgctacaatgctgtttcct
acagttctaggcagaactggtatcacggcctttgatctaagcaaggtgatagaaagtttc
attagacatgaaaagtctttaccaagagaactgaagcggcatctaaactctctggaggag
aggcttttggaaagcatggtgtgggataaaggctcctcattgtacaataccttgatagtt
gcaaggcctgcactctcttccgaaataaatcgtcttggcttattggcagaaccaatgcca
tctttggatgcaattgcaatgcatataaacttttccggaggtattccaacagtgccttct
ttgcagaagcatgaaacatcaccaagtaattttggtagcttgatcttaggtcaaaatggg
gatgtcaggtctccgaagagacaatgcactgactacaggagtgtattggttgaacggaat
tcttttacatcaccagcgaaggaccgtctattagctttcagcgaccttcggaaggctcct
ttgcaatctgtgtttgccagtccaacacgccctaaccctgttggtggaggagaaacatgt
gccgaaacaggaattaatatattctttagtaagattaataagttggctgctgtctggatt
aatggtatggttgagaggctacaactgtctcaagagattagggagagtgtatattttctt
tttcaacaaatacttagccagcggacttctctgttttttaaccatcatattgaccagatc
atcctttgttgtctctatgtagttgcaaagctttctcagttggaactaccgtttaaagaa
attactagaaactataggaagcaactgcaaggtagacccgaagtttactgcagtgtattt
gttgacagatcatcaacacaacagaacgggagaaccaggcaggatcatgttggtattgtc
gcattttacaatacaaaattcattcctgccataaaatatttgcttgaagaacttgatctt
tccagaacgactacaagaacaacccaggttcctgaatccaacaatagtaatgatggtcca
tgccctggatcacctaaagttgcctcttttccgagtctccctgatatgtccccaatgaaa
gtatctgcaaagcacaatgtatacgtgtccccattgcgagcatccaagatggatgctcta
atctcgcatagcgcgagaagctactatgcttgtgtcggagagagtacccgtgcctttcag
agtccttcaaaagacctaaccgccatcaacaatcagttgaacagtactcggaatatcaga
attaaactcaagttcgatgatcttgagggtggcttggttagtgattccatggttgcaaat
agcctttaccttcagagctggagccacacattggcatcctcaccaggtgcagctttaaaa
tctgagcaaccggaatcttag
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