Gossypium hirsutum (upland cotton): 107904465
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Entry
107904465 CDS
T04793
Name
(RefSeq) long chain acyl-CoA synthetase 4
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00061
Fatty acid biosynthesis
ghi00071
Fatty acid degradation
ghi01100
Metabolic pathways
ghi01212
Fatty acid metabolism
ghi04146
Peroxisome
Module
ghi_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
107904465
00071 Fatty acid degradation
107904465
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
107904465
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ghi01004
]
107904465
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ghi04147
]
107904465
Enzymes [BR:
ghi01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
107904465
Lipid biosynthesis proteins [BR:
ghi01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
107904465
Exosome [BR:
ghi04147
]
Exosomal proteins
Exosomal proteins of breast milk
107904465
Exosomal proteins of breast cancer cells
107904465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
107904465
NCBI-ProteinID:
XP_016686338
UniProt:
A0A1U8JCC9
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Position
D11:complement(1983625..1990395)
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AA seq
663 aa
AA seq
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MAEEKNYIIKVEEGKAATDERPSIGPVYRSCFAENGFPAPIPGMESCWDIFRMSVEKYPN
HHMLGHRQIVDGKAGKYVWQTYKQVYDIVMKVGNSIRSCGVEEGGKCGIYGANCPEWIMT
MEACNAHGLSCVPLYDTLGAGAVEFIICHAEVSIAFVEEKKIAELFKTFPNSTKYLRTII
SFGKVTPEQKAEAEKQGLAIFTWEEFLQLGENKQYDLPIKKKTDICTIMYTSGTTGDPKG
VLITNESIITLLAAVDCLLGRVNEELTMNDVYISYLPLAHIFDRVIEELFISHGASIGFW
RGDVKLLLEDIGELKPSVFCAVPRVLDRIYSGLQQKISEGGLLKKTLFNVAYSFKFYNMR
NGSKHAEASPFSDRIVFSQVKERLGGNLRIILSGAAPLSSHVEEFLRVVACCHVMQGYGL
TETCAGTFVSLPHELSMLGTVGPPVPNVDVRLESVPEMGYDALASTPRGEICLKGTTLFS
GYFKREDLTKEVMIDGWFHTGDIGEWQPNGSMKVIDRKKNIFKLSQGEYVAVENLENVYG
CVSDIESIWVYGNSFESYLVAVVNPNKQALERWAADNGVSGDFETICKDPKAKEYILGEL
TRTGKEKQLKGFEFIKAVHLDHVPFDMDRDLLTPTFKKKRPQLLKYYQSVIDDMYKSINK
PNA
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggagaagaattatataataaaggtagaggaagggaaggccgccaccgatgaa
agaccgtcgatcggccccgtttatcgcagttgttttgccgagaatggtttccctgctccg
attcctggaatggagagttgttgggacattttccgaatgtcagttgagaaatatcctaac
caccatatgctcggtcaccggcagattgtggatgggaaagctggaaaatatgtgtggcaa
acttacaaacaagtttatgacattgtaatgaaagtaggaaattccattcggagttgtggt
gttgaggagggaggaaagtgtggtatatatggtgccaattgcccagagtggataatgacc
atggaggcctgcaatgctcatggactctcttgtgttcctttatatgacactttaggtgct
ggtgctgtggagtttatcatatgccatgcggaagtttcaattgcttttgtagaggaaaag
aagattgctgaactgtttaaaacatttccaaactcaacaaaatacttgagaacaattatt
agctttgggaaggtaacacctgagcagaaggcagaagctgagaagcagggtttggcaata
tttacttgggaagaatttttgcaactgggagaaaataaacaatatgatcttcctataaag
aagaaaactgatatctgcacgataatgtatactagtggaacaactggtgatcccaaggga
gtattgattacaaatgaaagtatcattactcttttagcagcggtggattgtctgctagga
cgtgtaaatgaagagttgactatgaatgatgtttatatttcttatcttcctcttgcacat
atctttgaccgggtgattgaggagttatttatttctcacggtgcctcaataggattctgg
cgtggggacgtgaaactattacttgaagatattggggagctaaagccaagtgtcttctgc
gctgttcctcgtgtgctggatagaatctattcaggtttacaacaaaagatttctgaggga
ggcttattgaaaaagaccttgtttaatgtggcatattcattcaaattctacaacatgaga
aatggctccaaacatgcagaggcatctccattttccgacagaattgtattcagtcaggta
aaagaaagattgggagggaatttgaggattattctctctggagcagcacctctttcttct
cacgtggaagagttcctacgagtagtggcatgttgtcatgtgatgcaaggatatggtttg
acagagacttgtgctggaacttttgtttcattaccacatgagttgtcaatgcttggtact
gtggggcctccagtaccaaatgtggatgtacgcctagaatctgttcctgaaatgggatat
gatgcccttgcaagcacaccacgaggtgaaatttgtctcaagggaacaacattgttctca
gggtacttcaaacgtgaagacctcaccaaggaggtcatgattgatgggtggtttcacaca
ggggatattggtgagtggcaaccaaatggaagtatgaaagttattgatcgaaagaagaac
atctttaagctttcacaaggtgaatatgttgctgtcgagaacctggagaatgtttatggt
tgtgtttctgatattgaatcgatatgggtttatgggaacagctttgagtcctaccttgtt
gcggttgttaacccaaataagcaagcacttgaacgctgggctgctgacaatggtgtaagt
ggtgactttgaaaccatctgtaaagatccaaaggccaaagagtacatacttggagagctt
acaaggactggcaaagagaaacagctgaaaggttttgaatttataaaagctgtccatctc
gaccatgtaccgtttgacatggaccgcgaccttctcaccccaacatttaagaagaaaagg
cctcaattgctcaagtattatcagagtgtgatcgacgacatgtacaagagcataaacaag
ccaaatgcttga
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