Gossypium hirsutum (upland cotton): 107904472
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Entry
107904472 CDS
T04793
Name
(RefSeq) high mobility group B protein 6
KO
K09273
upstream-binding transcription factor
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ghi03000
]
107904472
03021 Transcription machinery [BR:
ghi03021
]
107904472
Transcription factors [BR:
ghi03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
107904472
Transcription machinery [BR:
ghi03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
107904472
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
CHDNT
Motif
Other DBs
NCBI-GeneID:
107904472
NCBI-ProteinID:
XP_016686348
UniProt:
A0A1U8JCE3
LinkDB
All DBs
Position
D11:1929493..1931757
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AA seq
491 aa
AA seq
DB search
MADTAVVVDVPRKSRNNGRKALKQKNPSSSSPSLSTNEANILAQKLSQQLSPTQAPSPMK
SDPSKENHDGLSQPLKGKAAGKGKQSKKSFEKDLQEMQDMLQKLRIEKEKTEELLKEKDE
MLKMKDEEIENKGKEQEKLQMELKKLQKMKEFKPNMKFAISMNKGGGFEKKRPSPPYILW
CKDQWKEIKKENPEADFKEVSNILGAKWKTIMAEEKKPYEEIYRAEKEVYLQAIAKEKRE
TEAMKLFEDEHKQKTAMELLEQYLQFKEEAEKETKKKTKKERDPLKPKQPMSAFFLFSNE
RRAALLADNGNKNVLEAAKIAGEEWKNMTAEQKKPYEEIAKKNKEKYMEEMEVYKQKKEE
EALNVKKQEEEMMKLQKQEALQLLKKKEKTDHIIKKTKEKRQQKKQQNSDPNKPKKPASS
FLLFSKEARKTLVQERQGINNSTLNALISVKWKELSEEERDVWNAKASEAMEVYKKQMEQ
YNKSAEEEQQH
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atggcggatacagctgttgttgttgatgtgccaaggaaatcaagaaacaatggaagaaaa
gccttgaaacagaagaacccatcatcatcatcaccatcattatcaacaaatgaagccaat
attttggcacaaaagctctcacagcagctttccccaacacaggctccttctccgatgaaa
tcagatccgtcgaaagagaaccacgacggactctctcaacctctcaaaggaaaagccgcg
ggcaaagggaaacagagcaagaaatctttcgagaaagacttgcaagaaatgcaagatatg
cttcaaaagctaaggatagagaaagaaaagaccgaagagttattgaaagagaaagatgaa
atgttgaagatgaaggatgaagagattgaaaataaaggtaaagagcaagagaagttgcaa
atggagctgaagaaattgcagaaaatgaaggaattcaagcctaatatgaaattcgcaatt
tcgatgaacaaaggaggaggatttgaaaagaaaaggccatctccaccttacattttgtgg
tgcaaagatcaatggaaagagataaagaaagagaatcccgaggctgatttcaaagaagtt
tcgaatattttgggtgcgaaatggaagacgatcatggccgaagaaaagaagccttacgaa
gagatatatcgagccgaaaaggaagtgtatttacaggcgattgcgaaagagaaacgcgag
acggaagccatgaaactctttgaagatgagcataaacaaaagacagcaatggagttactg
gaacaatacttgcagttcaaggaagaagctgagaaagaaaccaagaaaaaaaccaagaaa
gaaagggatcccttaaagcctaagcaacccatgtcggctttctttttgttctccaacgag
agaagggcggctttactcgccgataacggaaacaagaacgttttggaagcggcgaaaatc
gcgggcgaagaatggaagaacatgactgcagaacaaaaaaagccttatgaagagatagca
aagaagaacaaggaaaaatacatggaagaaatggaggtttacaagcagaaaaaggaagaa
gaagcattgaatgttaaaaaacaagaagaagagatgatgaaactacagaaacaagaagca
cttcaattgcttaaaaagaaagagaaaactgatcatatcattaaaaaaaccaaagagaaa
cgtcaacaaaagaagcagcagaattcagatcctaataaacctaaaaagcctgcatcttct
ttccttttgttcagcaaagaagcaaggaaaactctggtacaagaacgacaaggaatcaac
aactctacacttaatgccctgatttcagtgaaatggaaggagcttagtgaagaagaaagg
gatgtttggaatgcgaaagcaagtgaagccatggaagtatacaagaaacaaatggaacaa
tacaacaaatctgcagaggaggagcagcagcactag
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