Gossypium hirsutum (upland cotton): 107904552
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Entry
107904552 CDS
T04793
Name
(RefSeq) ubiquitin-60S ribosomal protein L40
KO
K02927
ubiquitin-large subunit ribosomal protein L40e
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03010
Ribosome
ghi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
107904552
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107904552
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
ghi03011
]
107904552
04121 Ubiquitin system [BR:
ghi04121
]
107904552
Ribosome [BR:
ghi03011
]
Ribosomal proteins
Eukaryotes
Large subunit
107904552
Archaea
107904552
Ubiquitin system [BR:
ghi04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
107904552
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_L40e
Rad60-SLD
Ubiquitin_2
zf-C4pol
Rad60-SLD_2
DUF2604
TBK1_ULD
UBL_UBAC1
Plexin_RBD
Ubiquitin_5
Dsc3_N
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
107904552
NCBI-ProteinID:
XP_016686452
UniProt:
A0A1U8NH30
LinkDB
All DBs
Position
D11:1352862..1354882
Genome browser
AA seq
128 aa
AA seq
DB search
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQ
LRPKKKIK
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcttcgtgaaaaccctaacagggaagaccataaccctagaggtcgaatccagc
gacactatcgacaatgttaaggccaagatccaggacaaggaaggtattccaccggaccag
cagagattgatcttcgctggaaagcagctcgaagatggccgtactcttgctgactacaat
attcagaaagaatcaaccttgcatctggttctgagacttcgtggtggcattatcgagcct
tctttgatggcattggctaggaaatacaaccaggacaagatgatctgccgcaagtgttat
gctcgtctgcacccccgtgccgtgaactgcaggaaaaagaagtgtggacacagcaatcag
ttgaggccaaagaagaagatcaagtag
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