Gossypium hirsutum (upland cotton): 107904612
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Entry
107904612 CDS
T04793
Name
(RefSeq) cell division cycle 20.2, cofactor of APC complex
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107904612
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107904612
03036 Chromosome and associated proteins [BR:
ghi03036
]
107904612
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
107904612
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
107904612
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WDR55
ANAPC4_WD40
Beta-prop_EML
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
EIF3I
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
eIF2A
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
RMC1_N
WDR90_beta-prop_4th
Ge1_WD40
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_RIG_1st
CFAP43_N
WDR54
Beta-prop_VPS8
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
107904612
NCBI-ProteinID:
XP_016686528
UniProt:
A0A1U8JCW9
LinkDB
All DBs
Position
D11:956759..959258
Genome browser
AA seq
455 aa
AA seq
DB search
MDAGSLNSFSNLKGQSRCPLQEQLLFRKNSKENMDRFIPNRSAMDFDYAHYMLTDGRKIK
ENQTVCSPAREAYRKQLAETLNMNRTRILAFKNKPPAPVELFPSEHSTTSVHPTKSAKPR
RHIPQSSERTLDAPDLVDDFYLNLLDWGSSNVLAIALGNTVYLWDASDSSTSELVTVDDE
NGPVTSVSWAPDGRHIAIGLNNSEVQLWDSASNRQLRTLRECHRSRVGSMAWNNHILTTG
GMDGQIVNNDVRIRSHVVETYRGHQQEVCGLKWSASGQQLASGGNDNVVHIWDRSMASSN
SPTQWLHRLEEHTSAVKALAWCPFQSNLLATGGGGGDRTIKFWNTHTGACLNSVDTGSQV
CSLLWSKNERELLSSHGFTQNQLTLWKYPSMVKMAELTGHTSRVLYMAQSPDGCTVASAA
GDETLRFWNVFGVPEVAKTAPKVNREPFSHLNRIR
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaggatctttgaattctttttcaaacttgaagggtcaatctagatgcccactt
caagaacagcttctcttcagaaagaattctaaagaaaatatggatagattcataccaaac
cgttcagcaatggactttgattatgcacattacatgctgaccgatggaaggaagataaaa
gagaaccaaacagtgtgttcacctgccagggaggcctacaggaagcagctggctgagact
ttgaacatgaaccgtacccgaatcttggctttcaagaacaagccaccggcacctgtcgaa
ctcttcccttccgagcactcaaccacttcagttcatccgaccaaatccgcaaagccgaga
agacacattccccagagctctgagagaacattggacgctcctgatctcgttgacgatttt
tacctgaacttattggattggggcagcagcaatgtactagctatagcactcggaaacact
gtgtatctgtgggatgcttcagatagttctacttcagaacttgtcactgttgatgatgaa
aatggaccagtaacaagtgtgagttgggctcctgatggtcggcatattgccatcggctta
aacaattctgaagtacaactatgggattcagcttccaaccgacagctgcgtactctgaga
gaatgtcatagatcaagagtgggttcaatggcatggaacaatcacatcctcacgacagga
ggaatggatggtcagattgttaacaacgatgtgagaattagatcccatgttgtcgaaact
tacaggggacatcagcaagaggtttgtgggctgaaatggtcggcttccgggcaacaacta
gccagtggaggcaatgataatgttgttcacatatgggataggtccatggcatcttcaaat
tcgccaactcaatggcttcacaggttggaggagcatacctcagctgtcaaagcccttgcc
tggtgccctttccagagcaatttgctggccacaggtggaggtggcggagatcgaaccatc
aagttttggaacacacacactggtgcatgcttgaattcagttgacaccggctctcaggtt
tgctcattgctgtggagcaagaatgagagggagctattgagttctcatggatttactcag
aaccaattaactctttggaaatatccatcgatggtgaagatggcagagctaactggccac
acgtctagagtactttacatggctcaaagccctgatgggtgcaccgtggcatcagctgca
ggggatgagacactaagattctggaatgtttttggggtcccagaagtggctaaaactgct
ccgaaagtgaaccgtgagccattctctcatttgaaccgtatccggtga
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