KEGG   Gossypium hirsutum (upland cotton): 107904673
Entry
107904673         CDS       T04793                                 
Name
(RefSeq) actin-interacting protein 1-2
  KO
K24736  WD repeat-containing protein 1 (actin-interacting protein 1)
Organism
ghi  Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:ghi04990]
    107904673
Domain-containing proteins not elsewhere classified [BR:ghi04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   107904673
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd EIF3I WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_IFT140_1st ANAPC4_WD40 Beta-prop_WDR35_TULP_N Beta-prop_WDR19_1st NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_EIPR1 eIF2A Beta-prop_HPS5 Beta-prop_NUP159_NUP214 Beta-prop_SPT8 Beta-prop_DCAF12 KNTC1_N
Other DBs
NCBI-GeneID: 107904673
NCBI-ProteinID: XP_016686611
UniProt: A0A1U8J8E6
LinkDB
Position
D11:314514..320579
AA seq 609 aa
MPELAETYACVPSTERGRGILISGDPKSNKVLYTNGRSVIILDLNNPLNVSVYGEHAYPA
TVARFSPNGEWVASADVSGTVRIWGAYNDHVLKKEFKVLSGRIDDLQWSPDGMRIVACGD
GKGKSLVRAFMWDSGTNVGEFDGHSRRVLSCAFKPTRPFRIVTCGEDFLVNFYEGPPFKF
KQSHRDHANFVNCVRYSPDGSKFISVSSDKKGIIFDGKTAEKIGELSSEDPHKGSIYAAS
WSPEGKQVLTVSADKTAKVWDISEDGSGKLKKTLTCSGSGGVDDMLVGCRWQNDHLVTVS
LGGTISIFSASNLEKSPLQLSGHMKNITSLAVLKSDPKCVLSSSYDGLIVKWVQGLGYSG
KLQRKENSQIKCFAAAEEEIVTSGFDNKIWRISLHGDQCGDGDSVDIGSQPKDLSLALLS
PELALVTTDSGVVMLRCTKVVSTINLGFAVTASVVAPDGSEAIVGGQDGKLHVFCIVGDS
LKEEAVLEKHRGAITVIRYSPDFSMFASGDANREAIVWDRVSREVKLKNMLYHTARINCL
AWSPNNSMVATGSLDTCVIIYEVDKPASSRMTIKGAHLGGVYALAFTDEHSVVSSGEDAC
VRVWKLTPQ
NT seq 1830 nt   +upstreamnt  +downstreamnt
atgcctgagctcgcggaaacctacgcttgtgtcccatcaacagagcggggccgtggaatc
ctgatctcgggcgacccaaaatccaacaaggttctttacactaatgggcgatccgtcatt
attctcgaccttaacaatccactcaacgtctccgtttacggtgagcatgcgtatccggcc
acggtggcacggttctcgccgaacggggagtgggtcgcctcagctgacgtgtctggcacg
gttaggatctggggggcctacaacgaccacgtgttgaagaaagagttcaaggttttgtcg
ggtcggatcgatgatctacaatggtctcctgacgggatgcggatcgtcgcctgcggtgat
ggcaaagggaagtctctcgttcgcgcttttatgtgggattcaggcactaatgtgggtgag
tttgatggccattcaagacgagttctaagttgtgcctttaagccaacaagaccatttcgc
attgtgacttgtggagaggactttttggtgaatttctatgaaggcccaccctttaaattc
aagcaatctcacagagatcatgccaattttgtaaattgtgtaagatattctcctgatgga
agcaaattcatctctgtaagttctgataaaaagggtattatatttgatggaaaaactgcg
gagaagattggagagttgtcgtctgaagatccccacaaaggtagcatttatgcggccagc
tggagtcctgaaggtaagcaggtgctgacagtatctgctgataagactgcaaaagtatgg
gatatctctgaggatggtagtgggaagttgaagaaaacattgacatgttctggctcaggt
ggagttgatgatatgcttgttggatgtcgttggcagaacgaccatcttgtcactgtatct
ctaggtggcacaattagtatattttctgctagtaatcttgaaaaatccccactccaatta
tctggacacatgaagaatatcacttcattagctgtcctaaaaagtgacccaaaatgtgta
ctgtctagtagttatgatgggctaatagttaaatgggttcaagggttgggatatagtggt
aaattacagaggaaagagaattctcaaattaaatgctttgctgctgctgaagaagagatc
gttacttctggatttgacaataagatatggagaatttctcttcatggggatcagtgtggg
gatggagattcagttgatattggcagtcaaccgaaggacttgagccttgcccttctctct
cctgaacttgctttggttacaactgactcaggagttgttatgttgcgttgtacgaaagtg
gtatcaaccataaaccttggttttgctgtgacagcatcagtggttgcacctgatggaagt
gaagctattgttggtgggcaggatggaaaattgcatgtattttgtatagtaggtgattcc
ctcaaggaagaggcagttcttgagaaacaccgaggtgcaattactgtcattcgttactca
ccagatttctcaatgtttgcatctggagacgcaaatcgagaagctatagtctgggatcgt
gtctctcgagaggtaaagcttaaaaacatgctgtaccacactgctcggataaactgtctt
gcttggtctcccaataacagcatggttgctactggatcacttgacacctgtgtaataatt
tatgaggttgacaagcctgcatctagccgaatgaccataaaaggagctcatttaggtgga
gtttacgcattagcctttactgatgaacacagtgtggtaagctctggtgaggatgcttgt
gttcgagtgtggaaattgaccccgcaatga

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