Gossypium hirsutum (upland cotton): 107904673
Help
Entry
107904673 CDS
T04793
Name
(RefSeq) actin-interacting protein 1-2
KO
K24736
WD repeat-containing protein 1 (actin-interacting protein 1)
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ghi04990
]
107904673
Domain-containing proteins not elsewhere classified [BR:
ghi04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
107904673
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
EIF3I
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_EIPR1
eIF2A
Beta-prop_HPS5
Beta-prop_NUP159_NUP214
Beta-prop_SPT8
Beta-prop_DCAF12
KNTC1_N
Motif
Other DBs
NCBI-GeneID:
107904673
NCBI-ProteinID:
XP_016686611
UniProt:
A0A1U8J8E6
LinkDB
All DBs
Position
D11:314514..320579
Genome browser
AA seq
609 aa
AA seq
DB search
MPELAETYACVPSTERGRGILISGDPKSNKVLYTNGRSVIILDLNNPLNVSVYGEHAYPA
TVARFSPNGEWVASADVSGTVRIWGAYNDHVLKKEFKVLSGRIDDLQWSPDGMRIVACGD
GKGKSLVRAFMWDSGTNVGEFDGHSRRVLSCAFKPTRPFRIVTCGEDFLVNFYEGPPFKF
KQSHRDHANFVNCVRYSPDGSKFISVSSDKKGIIFDGKTAEKIGELSSEDPHKGSIYAAS
WSPEGKQVLTVSADKTAKVWDISEDGSGKLKKTLTCSGSGGVDDMLVGCRWQNDHLVTVS
LGGTISIFSASNLEKSPLQLSGHMKNITSLAVLKSDPKCVLSSSYDGLIVKWVQGLGYSG
KLQRKENSQIKCFAAAEEEIVTSGFDNKIWRISLHGDQCGDGDSVDIGSQPKDLSLALLS
PELALVTTDSGVVMLRCTKVVSTINLGFAVTASVVAPDGSEAIVGGQDGKLHVFCIVGDS
LKEEAVLEKHRGAITVIRYSPDFSMFASGDANREAIVWDRVSREVKLKNMLYHTARINCL
AWSPNNSMVATGSLDTCVIIYEVDKPASSRMTIKGAHLGGVYALAFTDEHSVVSSGEDAC
VRVWKLTPQ
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagctcgcggaaacctacgcttgtgtcccatcaacagagcggggccgtggaatc
ctgatctcgggcgacccaaaatccaacaaggttctttacactaatgggcgatccgtcatt
attctcgaccttaacaatccactcaacgtctccgtttacggtgagcatgcgtatccggcc
acggtggcacggttctcgccgaacggggagtgggtcgcctcagctgacgtgtctggcacg
gttaggatctggggggcctacaacgaccacgtgttgaagaaagagttcaaggttttgtcg
ggtcggatcgatgatctacaatggtctcctgacgggatgcggatcgtcgcctgcggtgat
ggcaaagggaagtctctcgttcgcgcttttatgtgggattcaggcactaatgtgggtgag
tttgatggccattcaagacgagttctaagttgtgcctttaagccaacaagaccatttcgc
attgtgacttgtggagaggactttttggtgaatttctatgaaggcccaccctttaaattc
aagcaatctcacagagatcatgccaattttgtaaattgtgtaagatattctcctgatgga
agcaaattcatctctgtaagttctgataaaaagggtattatatttgatggaaaaactgcg
gagaagattggagagttgtcgtctgaagatccccacaaaggtagcatttatgcggccagc
tggagtcctgaaggtaagcaggtgctgacagtatctgctgataagactgcaaaagtatgg
gatatctctgaggatggtagtgggaagttgaagaaaacattgacatgttctggctcaggt
ggagttgatgatatgcttgttggatgtcgttggcagaacgaccatcttgtcactgtatct
ctaggtggcacaattagtatattttctgctagtaatcttgaaaaatccccactccaatta
tctggacacatgaagaatatcacttcattagctgtcctaaaaagtgacccaaaatgtgta
ctgtctagtagttatgatgggctaatagttaaatgggttcaagggttgggatatagtggt
aaattacagaggaaagagaattctcaaattaaatgctttgctgctgctgaagaagagatc
gttacttctggatttgacaataagatatggagaatttctcttcatggggatcagtgtggg
gatggagattcagttgatattggcagtcaaccgaaggacttgagccttgcccttctctct
cctgaacttgctttggttacaactgactcaggagttgttatgttgcgttgtacgaaagtg
gtatcaaccataaaccttggttttgctgtgacagcatcagtggttgcacctgatggaagt
gaagctattgttggtgggcaggatggaaaattgcatgtattttgtatagtaggtgattcc
ctcaaggaagaggcagttcttgagaaacaccgaggtgcaattactgtcattcgttactca
ccagatttctcaatgtttgcatctggagacgcaaatcgagaagctatagtctgggatcgt
gtctctcgagaggtaaagcttaaaaacatgctgtaccacactgctcggataaactgtctt
gcttggtctcccaataacagcatggttgctactggatcacttgacacctgtgtaataatt
tatgaggttgacaagcctgcatctagccgaatgaccataaaaggagctcatttaggtgga
gtttacgcattagcctttactgatgaacacagtgtggtaagctctggtgaggatgcttgt
gttcgagtgtggaaattgaccccgcaatga
DBGET
integrated database retrieval system