Gossypium hirsutum (upland cotton): 107904717
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Entry
107904717 CDS
T04793
Name
(RefSeq) CSC1-like protein At3g54510 isoform X1
KO
K21989
calcium permeable stress-gated cation channel
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ghi02000
]
107904717
Transporters [BR:
ghi02000
]
Other transporters
Pores ion channels [TC:
1
]
107904717
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSN1_7TM
RSN1_TM
PHM7_cyt
RRM_1
Taxilin
Motif
Other DBs
NCBI-GeneID:
107904717
NCBI-ProteinID:
XP_016686668
UniProt:
A0A1U8JD99
LinkDB
All DBs
Position
D05:28454448..28458398
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AA seq
710 aa
AA seq
DB search
MNSESLLASVGINIGLAMVILFLFSILKKQPSNAAIYYPRPLSKRHPITFPPFSLRRFIP
SFSWIPRAFRVTEDEILQTNGLDALIVIRLFKFGINFFTVCSSVGLLILLPINFGGQPAS
SDSYRSMDSCTISNIKTGSNMLWVHFMCLWFISLYGLHLLYREYSEILVKRIQQVRNLRH
RPDQFTTLVREIPVCGEHQARGCCVDHFFSKYHPYSYHSYKMLYDGKNIEDLSKQARYVH
EKVQGLRKKCEGKKHGKESDECRDDLLKITGLEEKLEELCRKIRQLQSEDMLKGKELPVA
FVTFKSRWGAAMAAQTQQHTNPLLWITEMAPEPSDVSWRNLSIQYKILPVYKIGVILAAT
LLTIFFAVPVTAVQGIAKFEKLKKWFPPAMAIEFIPGLSSVVTGYLPSAVLKGFIYIVPF
AMLGMAKLGGSISKSKEEIKACNMVFYFLLGNVFFLSLISGSLLDEIGEYVSHPKNFPSH
LAALVSSQADFFMTYILTEGLSGFSLEVLQPGLLIWDFIKSRTYCRGKEKDLYLYSLQYF
RIIPIVSLSILIGIVYAVIAPLLLPFLIVYFFLGYAVYINQIQDVYETVYDTCGTFWPFI
HHYIIVAIILMQITMIGLFGLKSKPAASVSTIPLLLLTIMFNEYCKIRFLPAFRSHSIQN
AVENDEFDEKSSEVEHSFDKAIEEYLQPCLVPVSFTQSDSSLYQPLITSW
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgaattcagagagtttattggcttcggtaggcattaacataggactggcaatggtgatt
ctatttctcttctcaatcttgaagaaacagccttcaaatgctgccatatattaccctcgt
cctctttccaaacgacatcccatcaccttccctcctttctctctccgtcgtttcattcct
tccttttcgtggatccctcgtgcctttcgcgtcactgaagatgaaatcctccaaaccaat
ggccttgatgcactcattgttataagactcttcaagttcgggattaatttctttactgtt
tgctcttctgttggattgctaatactcctaccaattaattttggtggacagccagcttct
tctgatagctatcgttccatggattcttgcacaatatccaacatcaaaacaggttctaac
atgctttgggtgcattttatgtgcttgtggtttatatctctctatggattacacctttta
tatagggaatattctgagattttggttaaaaggattcaacaagttcgaaacctcaggcat
cgtccggatcaatttacgactctagttcgagaaattccggtctgcggtgaacaccaggct
cgtggctgttgtgttgatcacttcttttctaaatatcatccttacagttatcattcatac
aaaatgttatatgatgggaaaaacattgaagatctgtcgaagcaggcgagatatgtgcat
gaaaaggttcagggattaagaaagaaatgtgaaggcaagaaacatggtaaagaatcggat
gaatgtcgagatgatttattgaaaattacagggcttgaggaaaagcttgaggaactttgt
cgtaagattcgccaattacagagtgaagatatgctcaaaggaaaggaattacctgtggca
tttgtgacattcaaatctcggtggggagcagcaatggcggctcaaactcagcagcacacg
aatccacttctatggatcactgaaatggctcccgaaccgagtgatgtctcatggaggaat
ctatcaattcaatacaaaatcttgcctgtttataaaataggagtcattcttgcagcaaca
cttctcactattttctttgcagtgcccgtcactgctgttcaagggattgctaagtttgag
aaacttaagaaatggtttcctccagcaatggctatagaattcataccaggattatcctca
gtggtgacagggtaccttccaagtgcagtcctcaaagggttcatatacattgttccattt
gcaatgcttgggatggctaaactgggtgggtccatctcaaaaagcaaagaggagatcaaa
gcttgcaacatggttttctattttctgttggggaatgttttctttttgagtttgatttca
ggctctttacttgatgagattggagaatatgttagtcatcctaagaattttcctagtcat
cttgctgctctcgtctcttctcaggcagatttcttcatgacatacatcctcacagagggg
ctctcagggttttctttggaagttcttcagccaggattactaatctgggattttataaaa
tcccggacttactgccgaggaaaagagaaagatctttatctttattcactgcaatatttc
cggatcatccccatcgtctccctttcaatactgattggcatagtgtatgcagtcattgcc
ccattgttgcttccttttcttattgtctacttcttcctcggctatgccgtctatatcaat
cagattcaggatgtatacgaaactgtttatgacacatgtggtacattttggccattcatt
catcattacataattgttgcaatcattctgatgcaaatcacaatgattggtctcttcgga
ttgaagtcgaaaccagcagcttccgtatccaccattcccctccttttgctcaccataatg
ttcaatgagtactgcaagattcgctttcttcctgcatttcgaagccactctattcagaat
gctgttgaaaacgatgaatttgatgagaaaagtagtgaggtggaacatagctttgacaag
gcaattgaagaatatcttcagccatgtttggttcctgtgagttttacacaatcagactct
agcttgtaccagcctttgattacatcatggtag
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