KEGG   Gossypium hirsutum (upland cotton): 107904916
Entry
107904916         CDS       T04793                                 
Name
(RefSeq) ras-related protein Rab7 isoform X2
  KO
K07897  Ras-related protein Rab-7A
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi04144  Endocytosis
ghi04145  Phagosome
ghi04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    107904916
   04145 Phagosome
    107904916
   04148 Efferocytosis
    107904916
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ghi04131]
    107904916
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ghi04147]
    107904916
   04031 GTP-binding proteins [BR:ghi04031]
    107904916
Membrane trafficking [BR:ghi04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    107904916
Exosome [BR:ghi04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   107904916
  Exosomal proteins of other body fluids (saliva and urine)
   107904916
  Exosomal proteins of colorectal cancer cells
   107904916
  Exosomal proteins of bladder cancer cells
   107904916
GTP-binding proteins [BR:ghi04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    107904916
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU Gtr1_RagA AAA_16 ATP_bind_1 RsgA_GTPase PduV-EutP nSTAND3 AAA_7 AAA_22
Other DBs
NCBI-GeneID: 107904916
NCBI-ProteinID: XP_016686925
UniProt: A0A1U8J9C0
LinkDB
Position
D05:complement(26986993..26991759)
AA seq 204 aa
MAMRRRTLLKVIVLGDSAVGKTSLMNQYVHKFSQQYKATIGADFVTKELQIEDRLLTLQI
WDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDSLDNWHDEFLKQANPTDPRMFPFM
LLGNKIDIDGGNSRVVSEKKAKDWCASKGNIPYFETSAKEDINVDAALLSIAKSALAKER
EQDIYFQGIPEAVTETEQRSGCAC
NT seq 615 nt   +upstreamnt  +downstreamnt
atggcaatgcgaagacgaaccttgctcaaggtcattgttctcggcgatagcgcggtgggt
aagacgtcgttgatgaatcaatatgttcataagttcagtcagcaatataaagcaacaata
ggtgctgattttgtcactaaggaactccagattgaagatcgccttctcactctgcaaata
tgggatactgcagggcaggagcggtttcagagtctcggcgttgccttctataggggtgca
gattgttgtgtgctagtttatgatgttaatgtgatgaaatcatttgatagccttgataat
tggcatgatgagtttcttaagcaggccaatccaacagatcccaggatgtttccctttatg
ttgcttggaaacaaaatagatattgatggtggtaatagtcgagtggtctccgagaagaaa
gcaaaagattggtgtgcttcaaaaggaaacataccttactttgaaacatcagcaaaagaa
gatatcaatgttgatgctgcattactttctattgccaaatctgctctagcaaaagagcgc
gagcaggacatatatttccagggcatcccagaagccgtgacagagaccgagcaaagaagt
ggttgtgcatgttga

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