Gossypium hirsutum (upland cotton): 107904953
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Entry
107904953 CDS
T04793
Name
(RefSeq) probable DNA-3-methyladenine glycosylase 2
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
107904953
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ghi03400
]
107904953
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
107904953
DNA repair and recombination proteins [BR:
ghi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
107904953
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
107904953
NCBI-ProteinID:
XP_016686987
UniProt:
A0A1U8J9H6
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Position
D05:complement(25298901..25302872)
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AA seq
396 aa
AA seq
DB search
MGEQASGQPQPQAQSQPSNDSSDATQCQTQRQAQTQTKTENSNDAFAAAAPTVTTALVVS
ASTELTDGSPLTSSPPSKIPSRPRKIRKLSPDSNSEPNASQQATTSTTSTSVAVPLKTVP
RAPKAKLSQHRALVVAPQFFARSLSCEGEVETAVRHLRYADPLLASLIDLHPPPTFDTFQ
TPFLALTRSILYQQLAFKAGTSIYTRFIALCGGENGVVPETVLSLTPQQLRQIGVSGRKA
SYLHDLARKYQTGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIN
DLGIRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVEAKGAPSSAAAVAAG
ASLQPLPQEEHQHQQQPQLLDSINSILDLGACTWGQ
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaacaagcctcgggacagcctcaaccacaggctcaatctcagccttcaaacgac
tcttccgacgcgacccaatgccaaacccaaaggcaagcccaaactcaaactaaaactgaa
aactcgaatgatgccttcgccgccgctgctcccaccgttactaccgccctcgttgtctct
gcttcaacggaactcaccgatggttctccccttacatcctctcctccttctaaaatccct
tctcgccctagaaaaatccggaaactctcccctgactcgaattccgaaccgaatgcctcc
caacaagcgacgacttccacaacatcaacatccgtagcggtgccgcttaaaaccgtcccc
agagctcccaaagcaaaactcagtcagcatcgagccctagtggtggctccccaattcttt
gctcgttccctctcttgtgaaggcgaggttgaaaccgccgttcgacacctccgttacgcc
gatcccctccttgcttcgttgatcgatctccatccgcctccaaccttcgacactttccag
acccctttcctcgctctcacccgaagcattctctaccaacagctcgctttcaaagctgga
acttccatctacactcgcttcatcgctctctgcggcggcgaaaacggtgtcgttcccgag
actgttctttccttaacccctcaacagctacggcaaattggtgtctcaggacgaaaagcg
agttaccttcacgatctcgcgaggaaataccagacagggatattatcagactccgcaatt
gtaaatatggatgataagtcactttttaccatgcttactatggtcaatgggatcggttct
tggtccgttcatatgtttatgatcttctcgcttcatagacccgatgttttaccgattaat
gatctcgggattcggaaaggggttcagttactctacagtttggaggagttgccgaggcct
tcgcagatggatcaattgtgtgagaaatggaggccttataggtcagttgcttcgtggtat
ctctggcggtttgtggaggccaaaggagcaccttctagtgcagccgctgttgctgctggt
gctagtcttcagccactgccgcaagaggagcatcaacatcagcagcagccccagcttctc
gattccattaatagcattctggaccttggggcctgtacttgggggcaatga
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