Gossypium hirsutum (upland cotton): 107904967
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Entry
107904967 CDS
T04793
Name
(RefSeq) transcription initiation factor IIF subunit beta isoform X2
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107904967
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ghi03021
]
107904967
Transcription machinery [BR:
ghi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
107904967
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_beta
TFIIF_beta_N
UBR1-like_wing
Tau95
Motif
Other DBs
NCBI-GeneID:
107904967
NCBI-ProteinID:
XP_016687001
UniProt:
A0A1U8J9K9
LinkDB
All DBs
Position
D05:25133345..25135772
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AA seq
267 aa
AA seq
DB search
MDEDHNNGGFLDMGKTDRSVWLMKCPVVVAKSWKSQLASSSSSSSSSSSDSQPLAKVVFS
LDPLKPDDPSLHQFTMEVAGLETERIPKSYSLNMFKDFVPMCVFSESSQGSVAMEGKVEH
KFDMKPHEENIEEYGRLCRERTNKSMIKNRQIQVIDNDSGVHMRPMPGMVGLISSNPKDK
KKTMPVKQSDVKRTRRDRGELEDIMFKLFERQPNWTLKQLVQETDQPAQFLKEILNELCV
YNKRGANQGTYELKPEYKKSAEDTAAE
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagatcacaacaacggcggctttttggatatgggaaaaactgatagatcggtt
tggttgatgaagtgccccgtcgtggtcgccaagtcatggaagagccaactagcttcttct
tcttcttcttcttcttcttcttcttctgattctcagcctctcgccaaggttgtcttctcc
ctcgaccctctcaaacccgacgacccttctttacaccagtttactatggaggtggctgga
ttagagaccgaaagaatacccaaaagctactctttgaacatgttcaaagactttgttcct
atgtgtgtcttctctgaatcaagtcaaggttcggttgcaatggaaggaaaagttgagcat
aaattcgacatgaaaccgcatgaggaaaacatcgaggaatatgggagattgtgtcgagaa
aggacaaataagtccatgatcaagaacaggcaaatacaggttatagataatgacagcgga
gttcacatgaggccaatgcctggaatggttggcttgatttcgtccaaccccaaggataag
aagaaaacaatgccagttaaacaatcagatgtgaaaagaacccgaagggatcgtggggaa
ctggaagatataatgttcaagctgtttgaaagacaaccaaattggactttgaagcaactt
gtccaagagactgatcagcctgctcaattccttaaagagatactgaacgagctctgcgtg
tacaataagagaggcgccaatcaaggaacctacgagcttaagccagagtataaaaaatct
gcagaggacactgcagctgaataa
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