Gossypium hirsutum (upland cotton): 107905049
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Entry
107905049 CDS
T04793
Name
(RefSeq) tRNA modification GTPase MnmE-like isoform X1
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ghi03016
]
107905049
Transfer RNA biogenesis [BR:
ghi03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
107905049
Prokaryotic type
Methyltransferases
107905049
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TrmE_N
MnmE_helical
MMR_HSR1
FeoB_N
RsgA_GTPase
Ras
AIG1
Roc
GTP_EFTU
HopBA1
MMR_HSR1_Xtn
Motif
Other DBs
NCBI-GeneID:
107905049
NCBI-ProteinID:
XP_040950228
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All DBs
Position
D05:complement(21256949..21260681)
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AA seq
484 aa
AA seq
DB search
MIISENSHTATMALLPSFRTIITRFYRPTKPPPQLIFSSLLFPKKLSSLFPLPPKPQPLK
PLASTRQETSFVSNRDERLVGLGSVNNGGSIEAQSSTSTIAAIVTSLGGPPAAVGIVRLS
GPNAVDIAGRVFSPAKKKKRFDSGSGSWKPKSHIVEYGVVLDSQGNVVDEVLAVPMLAPK
SYTREDVVELQCHGSEVCLRRVLKACLEAGARLAEPGEFTLRAFLNGRLDLSQAENVGKL
ISAKSVAAADAALAGMQGGFSTLVRSLREQCIELLTEIEARLDFEDEMPPLDVNVIMDRM
HAMSQDVEHALETANYDKLLQSGLQIAIVGRPNVGKSSLLNGWSKSERAIVTEIAGTARD
VVEASVSVAGVAVTLLDTAGIRETDDIVEKIGVERSEAVAMGADVIIMTVSAIDGWTLED
TKLLERIRSNMGSASIPMILVINKIDCASSACSDWVDGEAKSFSKHVFTCAITGQGIHDL
EKSI
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgataatcagtgaaaactcacacacggcaacaatggctttactcccatctttccgtact
attatcactcgtttttacaggccaacgaaaccgcctccacaactgatcttttcctcgctt
ttgttccccaaaaagctctcttctcttttccctctcccccctaaaccccaaccacttaaa
ccccttgcctccactcgccaagagactagtttcgtttccaacagagatgagcgcttggtg
ggtttgggttcagtgaacaatggtggttcaattgaggcccagagctcgaccagcaccatt
gcagccatcgtcacttctctaggaggccctcctgctgccgttggcattgttcgtttgtct
ggtcccaacgctgtcgatatcgctggccgtgttttttccccggctaagaagaagaagagg
tttgattcaggttcgggttcttggaaacctaaaagtcatattgttgaatatggcgttgtt
ttggattctcaggggaatgtagttgatgaggttttagctgtgccaatgctggctccaaaa
tcatatactcgtgaagatgtggttgagctccagtgccatgggagtgaagtgtgtctgcgt
cgtgtgttgaaggcttgtttagaagctggagcaaggcttgctgaaccaggcgagtttacc
ctccgtgcattcttaaatggtcgattagatctttcccaagctgaaaatgttggaaaatta
atttcagctaagtctgttgctgccgctgatgcagctttggcaggaatgcaggggggcttc
tctactttagtcagatcattgcgagaacaatgcattgaattgcttactgagatagaggct
cgtttagattttgaggatgagatgcctccactcgatgtcaacgtaattatggatagaatg
catgccatgtctcaggatgtagagcacgcactggaaactgccaattatgacaaacttctg
caatcaggattgcagatagcaattgttggccgtccgaatgttgggaagtcaagcctcctt
aatggatggagcaaaagtgagagagcaatagttacagagattgcaggaaccgctagggat
gtggtggaagccagtgttagcgttgctggtgtcgctgttacacttcttgatactgcaggc
atcagggaaactgatgatatcgtggagaagattggtgtggaaagatctgaagctgttgct
atgggtgctgatgtcatcatcatgacggtgagtgcaattgatggatggactctggaagat
acgaaacttcttgagaggattcgatccaatatgggatcagcatccattccgatgattcta
gtaatcaataaaatagactgtgcttcatctgcttgctctgattgggtcgatggagaagcc
aagtcgttcagtaagcatgtctttacgtgtgccatcactggtcaagggatacatgacttg
gagaaatcaatctga
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