Gossypium hirsutum (upland cotton): 107905290
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Entry
107905290 CDS
T04793
Name
(RefSeq) probable DNA helicase MCM8 isoform X1
KO
K10737
DNA helicase MCM8 [EC:
5.6.2.4
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ghi03032
]
107905290
03400 DNA repair and recombination proteins [BR:
ghi03400
]
107905290
Enzymes [BR:
ghi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
107905290
DNA replication proteins [BR:
ghi03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
107905290
DNA repair and recombination proteins [BR:
ghi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
107905290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCM
WHD_MCM8
MCM_OB
MCM_lid
AAA_5
Mg_chelatase
AAA_3
Sigma54_activat
AAA_16
cobW
DUF1980_C
MCM_N
AAA
AAA_30
CDC24
Motif
Other DBs
NCBI-GeneID:
107905290
NCBI-ProteinID:
XP_016687405
UniProt:
A0A1U8JAR7
LinkDB
All DBs
Position
D01:complement(63606942..63616434)
Genome browser
AA seq
793 aa
AA seq
DB search
MFGSHGERSIEKYGSINASNVGSIVPVYFTENEYSKDEEKLIFDLIRFFSASPGKDLADQ
VKDDCGAVSLSLDYQRFRRLCDIEEFYAKMEDKPKIALSCMSAAIHQVLLNNQDFYLEEG
KKINIRLHNYPESMTVLKNLKAAYIDKLVSVRGTVVKASNVKPLVIKMNFACEKCATEIP
RSFPDGKFSPPSACTIHGCKSRTFKPIRSSAQAIDFQKIRLQELLKSEDHEEGRVPRTVE
CELTEDLVDLCIPGDVATVTGIIRVINNYMDIGGGKSKGRNQGFYYLYIEAVSIKNSKSL
SVTEDMEDSNSDARAKELVDLFSFSPRDLEFIVKFSKEHGSDVFRQILQSICPSIYGHEL
VKAGITLALFGGVRKHSMDRNKVPVRGDIHVIVVGDPGLGKSQLLQAAAAVSPRGIYVCG
NATTNAGLTVAVVKDTMTNDYAFEAGAMVLADGGLCCIDEFDKMSAEHQALLEAMEQQCV
SVAKAGLVASLSARTSVLAAANPVGGHYNRAKTVNENLKMSPALLSRFDLVFILLDKPDE
QLDKQLSEHIMSLHAGYGESSPALKKPRIAKASQNVEAITMRVKGGSLVSRLRLDPKKDA
DFVPLPGALLRKYISYARTYVFPRMSKPAAEILQKFYLQLRDRNTSGDGTPITARQLESL
VRLTQARARVDLREEITVQDAKDAVEIMKESLYDKYVDEHGFVDFGRSGGMSQQKEAKRF
LSALNKQSELQQKDCFSISEIYSLADRIGLRVPDIDTFVDNLNSVGYLLKKGPKTYQVLS
SSYSRSQPSRSRC
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgtttggatctcacggggagagatcaattgaaaaatacggttcgattaatgcaagcaac
gttggctctatcgttcccgtttatttcaccgaaaacgagtactccaaggacgaagaaaag
cttatttttgacctcattcgtttcttctccgcttctccagggaaagatcttgctgatcag
gtaaaggatgactgtggtgccgtttctttgtctcttgattaccaacgatttcgaagatta
tgtgatatcgaagaattctatgccaaaatggaagataagcctaaaatagctctctcatgc
atgagtgccgctattcaccaggttttattaaacaaccaggatttctacttggaggaagga
aagaagataaatattcgtctgcacaactaccctgaatccatgactgtcttgaagaattta
aaggcagcatatatcgacaagcttgtatctgtgcggggtacagtggtaaaagctagcaat
gtcaagcctcttgtgattaaaatgaattttgcctgtgaaaaatgtgcaaccgagattcct
cgttcatttcctgatggaaagttttcgccaccatcagcttgtactatacatggctgcaag
agcagaacattcaaaccaattcgatcctcggctcaagcgatagattttcagaagataagg
ttacaggagctgctgaagtctgaggatcatgaagaaggtcgtgtccctcgaacagtagaa
tgtgaattgactgaagatcttgttgatctttgcatccctggagatgtagcaacagtcacg
ggaattataagagttatcaacaattacatggatattggaggaggaaaatcaaaaggcaga
aatcaaggattttactatctgtacatagaagcagtttctataaaaaattctaagtcgctc
tctgtgactgaggatatggaagattccaatagtgatgctagagcaaaagagctagttgat
ttgttctctttctctccaagggatttggaatttattgtgaagttttcaaaagagcatggt
tcagatgtctttcgccaaatacttcaatccatatgtccatccatctatggacatgagctt
gttaaagctgggataactttggcgttgtttggtggagtacgaaaacattcaatggatcgg
aataaggtcccagtcagaggagacatccatgtcattgttgttggtgatccaggtctaggg
aagagccaactgctgcaagcagcggctgctgtttccccacgtggtatatatgtttgtggc
aatgccaccactaatgctggtttaactgtagctgtagtgaaggacactatgacaaatgac
tatgcttttgaggctggagccatggtactggcagatggtggactatgctgtatagatgag
tttgataaaatgtctgctgaacatcaggctttactggaagcaatggaacaacagtgtgtt
tctgttgcaaaagctggactggtagcaagtttatctgctcgaacatctgtcttagcagca
gcaaatcctgttggtggtcattataaccgtgcgaaaacagtcaatgaaaatttgaaaatg
agtccagctttgctctcaagatttgatttggttttcatattacttgataaacctgatgag
cagctggacaagcaactttcggagcacataatgtcacttcatgcaggatatggagaaagt
tcaccagcactgaaaaagccacgtatagctaaagcatcacaaaacgttgaagcaataact
atgagagtgaaaggaggttctttagtttctaggctgagacttgaccccaaaaaggatgct
gattttgtcccattgcctggtgcacttcttcgcaaatatatttcttatgcaagaacatac
gtcttccccaggatgtccaaaccagcagcggaaatcctgcaaaaattctacttacaacta
agagaccgcaatacatctggtgatggcacgcctataacagcgagacaattggagagtctg
gttagactaacacaagctcgagcacgagtggatttgagagaagaaataacagtccaagat
gctaaggatgcagttgaaataatgaaagaatccctgtacgataagtatgttgatgagcat
ggatttgtggattttggtcgaagtgggggaatgagtcaacaaaaagaagcaaagcgcttt
ttaagtgctttaaacaagcaatcagagttgcaacaaaaagattgcttctccatatctgaa
atctatagtttggcagatagaattgggttaagagttcctgatattgacacatttgtggat
aacttaaacagtgtaggttatcttcttaagaaagggccaaagacataccaggtgttatca
tcatcatattcaagaagccaaccatcaagatcaagatgctaa
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