Gossypium hirsutum (upland cotton): 107905375
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Entry
107905375 CDS
T04793
Name
(RefSeq) ubiquitin-like modifier-activating enzyme atg7 isoform X1
KO
K08337
ubiquitin-like modifier-activating enzyme ATG7
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
107905375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107905375
04121 Ubiquitin system [BR:
ghi04121
]
107905375
03029 Mitochondrial biogenesis [BR:
ghi03029
]
107905375
Membrane trafficking [BR:
ghi04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
107905375
Atg8 conjugation proteins
107905375
Ubiquitin system [BR:
ghi04121
]
Ubiquitin-activating enzymes (E1)
UBL-activating enzymes
107905375
Mitochondrial biogenesis [BR:
ghi03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
107905375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG7_N
ThiF
Shikimate_DH
rRNA_methylase
Motif
Other DBs
NCBI-GeneID:
107905375
NCBI-ProteinID:
XP_016687507
UniProt:
A0A1U8JB03
LinkDB
All DBs
Position
A05:15399852..15404756
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AA seq
711 aa
AA seq
DB search
MAKEGSGSILQFAPLQSSVDEGFWHRLSSLKLNKFGIDDSPIPISGFYAPCSHPQVSNHL
TLLAESLLSDSNDESTMPSVIRGNRNRCSVPGILYNTNTMEGFHALDKQGLLKAEAMKIW
EEIHSGKAVEDCAVLSRVLLISFADLKKWNFHYWFAFPALALDPPATLVDLRPASQWFTL
EEAESVSTACNEWRNSSVTADVPFFLVSIGSDSHAAVRHLKDLEACQRDGQKLLFAFYDP
CHLPNNPGWPLRNFLALISARWNLKTVRFLCYRENRGFADLNLSLVGEALITVQQGWREQ
QCVPNAVGWELNKGRKVPRCINLAKSMDPTRLAISAADLNLKLMRWRALPSLNLEILFSL
KCLLLGAGTLGCQVARMLMAWGVRRITLLDNGRVAMSNPLRQSLYTLDDCHNGGDFKATA
AVRSLQRIFPAVEAEGIVMAIPMPGHPVSSQEEKSVLEDCKRLNDLIDSHDVIFLLTDTR
ESRWLPTLLCANRNKITITAALGFDSFLVMRHGPGPFNSIPNLKAEMEDSLAAGMDNLVL
TNTDGQHRLGCYFCNDVVAPTDSTSNRMLDQQCTVTRPGLAPIASALAVELLVGILHHPN
GIFAEAEIANSSSGGNFELPLGILPHQIRGSLPHFQQMTLLGHSSNSCTACCSTVVSEYR
KRGMQFILQAINHPTYLEDVTGLTELMRSANSFQLDWDDDIEVADDECVEL
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagaagggagcggatccatacttcaatttgcgccacttcagagttctgttgac
gaaggattttggcaccgattatcttctttgaagctcaacaagtttggcatcgacgattct
cctattcctatctccggtttctatgcaccgtgctcgcatcctcaagtatcgaatcattta
actcttttagcggaatccctgctttctgactcaaatgatgaatcaacaatgccgtctgtt
attcggggtaatcgaaataggtgctccgttcctggcattctttacaatactaatacaatg
gaaggttttcatgctttggataaacaaggcttgctcaaggcagaagcgatgaagatttgg
gaggagattcatagtggaaaagctgtggaggattgtgcagtattatcaagggtccttctt
atctcatttgcggacctcaaaaaatggaactttcattattggtttgctttccctgctctt
gcacttgatcctcctgctaccttggtagatttgaggccagcttctcaatggttcactttg
gaagaggcagagtctgtatcaacagcatgtaatgaatggcggaattcaagtgtgacggct
gatgttccattctttttggttagtattggttctgattcacatgctgccgtcaggcatctt
aaggatttggaagcttgtcaacgtgatggtcaaaagttgctatttgcattttatgaccca
tgccatcttccaaacaatcctggctggcctctccgcaacttcttagcacttatttctgcc
agatggaatctgaaaactgttcgctttttgtgctatagagagaatcgaggttttgctgat
ttgaatttgtcacttgttggtgaagccttgattacagttcaacaaggatggagagaacag
cagtgtgtgcccaatgctgtaggatgggaacttaacaaggggagaaaagtaccgaggtgt
attaaccttgctaagtccatggatccaactaggctagccatatctgctgcagacttaaac
ttgaaactaatgagatggcgtgctttgccatctcttaacttagaaatcttgttttctctt
aagtgccttctccttggagcaggtacccttggatgtcaggttgccagaatgcttatggct
tggggtgtccgcagaattacactgcttgataatggaagggtggctatgtctaatccgttg
agacagtctctatacactttggatgactgccataatggtggtgattttaaagccacagca
gcagtgagaagcttacaacgaatatttcctgcagtggaagctgaaggtattgttatggcc
attcctatgcctggacatccagtatccagccaagaagagaaaagtgtgcttgaagattgt
aaacgactcaatgatttgattgattctcatgatgtaattttcttgttgactgatactaga
gagagtcgatggctccctactcttctctgtgccaacaggaacaagataaccattactgca
gctctaggatttgatagtttcttggttatgcgccatgggcctggtccttttaactccatc
cctaacttgaaagctgaaatggaagactctttagctgctggcatggacaaccttgtccta
acaaatacagatggacaacatagactgggttgttacttctgtaatgatgtggttgcccca
acagattcaacttcaaaccgcatgttggatcagcagtgcactgttacacgtccaggactt
gcacctattgcttctgcactggcagtggagcttttagtgggcattttgcatcaccctaat
gggatatttgctgaagctgagattgccaactccagtagcggtggaaactttgagcttcca
ctgggtattttaccccatcagatacgaggctccctcccccactttcaacagatgaccctt
ttgggccactcctctaacagttgcacagcatgttgtagcactgttgtgtcagaatatcga
aagagaggtatgcaattcatactccaggctattaaccatccaacgtatctggaggatgtt
actggactaacagagttgatgagatcagcgaactcttttcaactggactgggacgatgat
attgaggttgcagatgatgaatgcgtcgaactatga
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