Gossypium hirsutum (upland cotton): 107905434
Help
Entry
107905434 CDS
T04793
Name
(RefSeq) DNA-3-methyladenine glycosylase-like
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
107905434
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ghi03400
]
107905434
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
107905434
DNA repair and recombination proteins [BR:
ghi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
107905434
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
107905434
NCBI-ProteinID:
XP_016687580
UniProt:
A0A1U8JB91
LinkDB
All DBs
Position
D05:complement(17439138..17443038)
Genome browser
AA seq
395 aa
AA seq
DB search
MGEQTPSQPQPQVQSQPPNDSSTTTQAQVQTQSGDPSNSSTAPFSTVTTACTAIVACGPT
ELVNVPLPTSSPPSKIPSRPRKIRKLSPDLSFDPNASQQATTSSSTSLTEQRKTVGRTSK
TKLSQHRALAVVAPRIISRSLSCEGEVENAIHHLRDADPLLASLIDLHPPPTFDTFHAPF
LALTRSILYQQLAFKAGTSIYTRFISLCGGENGVVPETVLSLTSQQLRQIGVSGRKASYL
HDLARKYQTGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLG
VRKGVQLLYNLEELPRPSQMDQLCEKWRPYRSVASWYLWRYVEAKGAPSSAAAVAAGASL
PPLQQQEEPQQHQQQPQLMDPINSILNLGACAWGQ
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaacaaaccccgtcgcagcctcagccgcaggttcaatctcagccaccgaatgac
tcctctactacgactcaagcccaagttcaaacccaatctggagacccgagtaattcctcc
acggcccctttttccaccgttaccaccgcctgtaccgccattgtagcatgtggtccgacg
gagctagtcaatgttcctctcccaacctcgtctcctccttcgaaaatcccttcccgccct
agaaaaatccggaaactctcccctgacctgagcttcgaccccaatgcctcccaacaagca
acgacctcctcctccacatccctgaccgaacagcgtaaaaccgtcggcagaacttccaaa
acaaaactcagtcaacatcgagccctagcggtggtggctccacgaatcatttctcggtcc
ctctcttgcgagggcgaggtcgaaaacgccatccaccaccttcgcgacgccgatcccctc
ctcgcttccttaatcgacctccatccacctccaaccttcgacactttccatgcccctttc
ctcgcgctcactcggagcattctctaccaacagctcgctttcaaagccggaacctccatc
tacacccgcttcatctctctctgcggaggcgaaaacggggttgttcctgaaactgttctt
tctttaacctctcaacagctgcgacaaattggtgtctcgggacgaaaagcgagttacctt
catgatctcgcaagaaaataccagacggggatattatcggactcggcgattgtaaatatg
gatgacaaatcacttttcaccatgcttacgatggtcaatgggatcggttcttggtcggtt
catatgttcatgattttttcgcttcatagacccgatgttttgccaattaatgatctcggg
gttcgaaaaggggttcaattgctctacaatttggaggagttgccaaggccgtcgcagatg
gatcaattgtgtgagaaatggaggccatacaggtcggttgcttcctggtatctttggagg
tatgtggaggccaaaggagcgccttcgagtgctgccgcggttgctgctggtgctagtctt
ccaccgctgcagcaacaagaggagccgcaacaacatcagcaacagccccagcttatggac
cccattaatagcattctcaaccttggggcctgtgcctgggggcaatga
DBGET
integrated database retrieval system
