Gossypium hirsutum (upland cotton): 107905638
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Entry
107905638 CDS
T04793
Name
(RefSeq) tRNA pseudouridine synthase Pus10 isoform X1
KO
K07583
tRNA pseudouridine synthase 10 [EC:
5.4.99.25
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ghi03016
]
107905638
Enzymes [BR:
ghi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
107905638
Transfer RNA biogenesis [BR:
ghi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
107905638
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Pus10_C
Pus10_N_euk
Motif
Other DBs
NCBI-GeneID:
107905638
NCBI-ProteinID:
XP_016687820
UniProt:
A0A1U8JBZ8
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Position
D05:16309682..16313624
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AA seq
542 aa
AA seq
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MSNEVESAQVSDAMEVAQLSSLAAVDSHAGSCEAEMPSRLLNDAVRSLPYHVVKDLLSIG
VCSRCVLRILGTEDHIYCHSSFSQSMLCSVLEEVTGFKSECDFQFCSVCLGVLQLIYRDD
KETLVKMESPNDMALVIAELVKKEGHQIDGFSLEVSIPQFILENESSLLSGMKKRYESEP
WLQERLLSKCVSVKDVLKFAITKPLETLLDTKASASSFRIRLAYTHKMAFGNSVERNQGF
KRRKIGTENGLQNVNDESVVANKDCSDYPTNETIAVTGRSSLKVPIDKVSEPCHLVYLCY
RTHIYLCGRYLKYSRNVSQTRWIIDEERMGEASVEEIIGSNILPMCRGDNYKFHAAGRED
IDVRMLGSGRPFLLEIQNARQVPSEETVKEIESKINGLENKLVGVKNLQVVGSQGWTLMR
EGEAEKQKQYCALVWISRPLEDEDVCSISLLNDMQILQKTPIRVLHRRSPLERKKIIYWM
KIERIAESSQYFLLHLCTQAGTYIKEFVHGDFGRTQPSIGSILGCRAEILQLDVTDVKMD
SE
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacgaggtcgagtctgcgcaggttagcgacgccatggaggtggcgcaacttagt
agcttggctgcagtggacagccacgccggttcttgcgaggcggagatgccgtcgcggctt
ctaaatgacgccgttcggtcattgccttatcatgtcgtcaaggaccttttgtctatcggg
gtgtgttctagatgcgttctacggatattgggtaccgaggaccatatttattgccattca
tcgttttcacaatcgatgctctgttcagttcttgaagaagtgactggttttaaatcagaa
tgcgattttcaattctgcagcgtttgcttgggtgtcttacagttaatttaccgcgatgac
aaagaaacgttggtgaaaatggagagtccaaatgacatggctttagtcattgcggagttg
gttaagaaagaaggccatcaaattgatggattttctctagaagtttccataccacaattt
atcttagaaaatgaatcctctttgttgtcaggtatgaagaagagatatgaatcagagcca
tggcttcaagaaaggttactttccaaatgcgtctctgttaaggatgttctgaaatttgct
ataacaaaaccccttgaaacgttattggatactaaagctagtgcaagctcttttcggatc
cgtttggcttacactcataaaatggcatttggaaattctgttgaaaggaatcagggattc
aaaaggcgaaaaataggcactgagaatgggttgcaaaatgtaaatgatgagtcagtagtt
gccaacaaagattgttccgattatcctactaatgaaacaattgctgtcactggaagatct
tctttgaaagtgcccatagataaggttagtgaaccttgccacttggtatacctttgctac
aggacgcatatttacctatgtggtagatatctgaagtactcaagaaatgtgagccaaaca
cgctggataattgatgaggaaaggatgggagaagcttctgttgaggagataataggtagc
aacatccttcctatgtgtcggggtgataattacaagtttcatgctgctggaagagaagat
attgatgtccgaatgttgggttcaggcaggccttttctgcttgagatacaaaatgcacgc
caagttccatccgaagagactgttaaggaaattgaatcaaagataaatggcttggagaat
aaactagttggagttaaaaatcttcaagtagtaggcagtcaaggttggacactgatgcgt
gaaggagaagccgagaagcagaagcaatattgtgcattagtgtggatttctcgtccactt
gaggatgaagatgtgtgctccatatcattgcttaatgacatgcaaattctgcaaaagacc
ccaatacgggtgcttcatcgtaggagtccattagaacgcaagaaaattatatattggatg
aagattgagaggattgctgaaagctcccaatattttcttttgcatctctgcactcaggct
ggaacttatatcaaggaatttgttcatggtgattttgggcgcactcaacccagtattgga
tcaatcctaggatgcagagcagagatattgcagctcgatgttacagacgtaaaaatggat
tctgagtga
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