Gossypium hirsutum (upland cotton): 107905646
Help
Entry
107905646 CDS
T04793
Name
(RefSeq) mRNA-capping enzyme isoform X1
KO
K13917
mRNA-capping enzyme [EC:
2.7.7.50
3.6.1.74
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107905646
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107905646
Enzymes [BR:
ghi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.50 mRNA guanylyltransferase
107905646
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.74 mRNA 5'-phosphatase
107905646
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
107905646
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
mRNA_cap_enzyme
mRNA_cap_C
DSPc
Tc-R-P
DNA_ligase_A_M
PTP-SAK
Y_phosphatase2
Y_phosphatase
PTP-NADK
Y_phosphatase3
F_actin_bind
Mitoc_L55
YafO_toxin
Motif
Other DBs
NCBI-GeneID:
107905646
NCBI-ProteinID:
XP_016687828
UniProt:
A0A1U8JGP6
LinkDB
All DBs
Position
D01:64550525..64558642
Genome browser
AA seq
683 aa
AA seq
DB search
MIVGMDLNASPLPEDDEDPYETHIEHYSAPEEHVESAVEISRREREERRKRLRSDRPDDR
PVHISQPVIYDHFYQNRNSTFYDKSRIPPGWLDCPAVGKEIGCIIPSKVPLGESYNDCVP
PGKRYSFKQAVHKQEVSGRKLGLVIDLTNTSRYYQTTDLKKKGIKHVKIQCRGRDAVPEN
ASVNTFVYEVSQFLLRQKSNKYILVHCTHGHNRTGYMIIHYLMRTQPMSVTQAIKFFSEA
RPPGIYKPDYIDALYAFYHERRPESLVCPPTPEWKRSSDLDLNGEAAVDDDDDDDDGAPT
ALPENHETDVMLTNDDVLGDEIPHDQQVQMRQFCYQQLKLNTGVRGHAQFPGSHPVSLNR
DNLQLLRQRYYYATWKADGTRYMMLITIDGCYLIDRSFNIRRVQMRFPCWHNKGVGGMSH
HLTLLDGEMIIDTLPDSRKQERRYLIYDMMVLNNEPIIERPFYERWKMLEKEVIEPRNYE
RHNIYQGRNPYYRFDLEPFRVRRKDFWLLSTVNKVLKEFIPKLSHEADGLIFQGWDDPYV
PRTHEGLLKWKYAQLNSVDFLFEIGSDDREQLFLHERGRKKLMEGNTVEFREVSDHPPSF
SGKIIECSWDPDRQVWVYMRIRTDKSTPNDINTYRKVMQSINDNITEEILLNEINEIIRL
PMYADRIRMDSKAHLHTNSARRR
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgattgttggtatggacctaaatgcttccccattacctgaagatgatgaagatccatat
gaaacacatatagaacactactctgctccagaagagcatgtagaatctgcagttgaaatt
tcacggcgggaacgcgaagagagacggaagagattgagaagtgaccgaccagatgaccgg
ccagtacatatctctcagcctgttatatatgatcacttctatcaaaataggaactcaaca
ttttatgataaaagcaggatccctcctggttggttggattgtcctgcggttggtaaggaa
ataggctgcatcattccttcgaaggttccacttggtgaatcttataatgactgtgttcct
cctggtaaaagatactcttttaaacaagcggttcataagcaagaagtttcaggaagaaag
cttggtttggtgattgatttgacgaacacttctcgttactatcaaactacagacctgaag
aaaaaaggcattaagcatgtaaagatacaatgtaggggaagggatgctgtacctgagaat
gcgtctgtaaatacctttgtttatgaggtgtcacaatttctcctacgtcagaaatcaaat
aaatatattcttgtccattgtactcatggtcataaccgcactggctacatgattattcac
tatctcatgcgaacacagccaatgtctgttactcaggcaataaaatttttttctgaggca
cgcccaccaggaatatataaaccagactatattgatgccctgtatgcattttatcatgaa
agaagaccagaatctcttgtctgccctccaactcctgagtggaaaagatcttctgatctt
gatctcaacggtgaagcagctgtagatgatgatgatgatgatgatgatggagctccaact
gcattacctgagaatcatgaaactgatgtaatgttgacaaatgatgacgttttgggtgat
gaaatacctcatgaccagcaggtacaaatgaggcaattctgctatcaacaattgaagtta
aatactggggttagagggcatgcacagttcccgggatcacatccagtttcgctgaacagg
gacaatttacaacttttaaggcaacgctattattatgctacttggaaagcagatggaaca
cgatatatgatgttaataactatcgatggatgttacttaattgatagaagtttcaatatc
cgaagggttcagatgaggtttccatgctggcacaataaaggtgtaggtggcatgagtcat
catttgacattgcttgatggggaaatgataattgacaccctgccagactcacggaagcaa
gagagaagatatctcatctatgatatgatggttcttaacaatgaacctattatagagcgg
ccgttctatgaacgatggaaaatgctggaaaaagaagtgattgagcctcgaaattatgaa
cgccacaacatttaccagggcaggaatccttattaccgatttgaccttgaacccttcagg
gtgcggaggaaggacttttggttgctttctactgtaaataaggttttgaaagagtttatc
cccaagctctctcacgaggcagatggtcttatttttcagggttgggatgatccttatgta
cctcgcactcatgaaggtcttttgaagtggaaatatgctcagttgaactctgttgacttt
ctatttgagattggaagcgatgatcgtgaacaactttttctccatgaacggggaagaaag
aagttgatggaagggaatactgttgaattcagagaggtttcagatcatcctccatcgttc
tctgggaagattatcgagtgttcttgggatcctgatcgacaagtgtgggtctatatgagg
atcaggacagataagtcaactcccaatgatattaatacttacaggaaggttatgcaaagt
ataaacgataatatcacagaagaaatcttattaaacgagattaacgagatcattcgcttg
cccatgtatgctgatagaataaggatggacagcaaggcccacctgcatacaaattcagca
cgacggaggtga
DBGET
integrated database retrieval system