Gossypium hirsutum (upland cotton): 107905758 Help Entry 107905758         CDS       T04793                                  Name (RefSeq) Fanconi anemia group J protein   KO K15362   fanconi anemia group J protein [EC:5.6.2.3] Organism ghi  Gossypium hirsutum (upland cotton) Pathway ghi03440   Homologous recombination ghi03460   Fanconi anemia pathway Brite KEGG Orthology (KO) [BR:ghi00001]  09120 Genetic Information Processing   09124 Replication and repair    03440 Homologous recombination     107905758    03460 Fanconi anemia pathway     107905758  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:ghi03400]     107905758 Enzymes [BR:ghi01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      107905758 DNA repair and recombination proteins [BR:ghi03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     BRCA1-B complex      107905758    FA (Fanconi anemia) pathway     Downstream FA components      107905758 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Helicase_C_2 DEAD_2 HBB ResIII Yippee-Mis18 Motif Other DBs NCBI-GeneID:  107905758 NCBI-ProteinID:  XP_040969647 LinkDB All DBs Position A05:17540233..17555185 Genome browser AA seq 1218 aa AA seqDB search MSAALGTGNGAKPSKTPNPYFINPKNPKNVHHIAGIPVEFPYKPYGTQLSFMYRVISTLD RAQKDGHFHALIESPTGTGKSLSLLCSTLAWQKNYKINNIKGNLSQSIPDPEAVTDPLGH GGGFIPETQPSTSSIPSSSISEPPQNEANSKNKKKMLAPTIYYASRTHSQISQVIREYRK TSYRVPMAILASRKHYCTNPHVSKENIDEECKLLLSQEEGCSEFKNMHKVKCHPSVQKGG CHEAHDIEDIVKIGQIVKGCAYYAARSMADDAQLIFCPYSYIINPVIRGAMDVDIKGAII VLDEAHNLEDIAREGGSVDLEEDALHKLQMELHQLKMIKADVYQPLSEMIMNLISWIEQT KSKLEGTNESKHYFSSWTGDKAVRQLQEANISQQFFPVLLECATKAIRAASDTESDVLHL SGMSIITLEGLFSSLTYFFSRDGSHVFDYQLALQRYFKKDEKNASGSWTCSLGLWCLNPS VVFRDVSDLSLSVILTSGTLSPMNSFSSELGVQFGNCLEAPHVIDIKSQVWSAVISHGPD NYQLDASYKTADQYAFQDSLGKSLEEIFKIVPGGCLIFFPSYKLMKKLSDRWHNTGQWSQ LKARKPLFVEPRGGDQEEFETVLKGYYNSVSQVKKPKRRRIKRTDDNVIESAEVTSPRGA AFLAVFRGKVSEGIDFSDDNARVVIAVGIPFPNINDKQIELKKKYNNTYRSSKNLLSGNE WYCQQAFRALNQALGRCIRHRYDYGAIILLDWRFQDEKNRAHISKWLRPSIRMYGSFEKS LDELRSFFREVKDLVSKNKQLSSLAKYDTTFPQMKPQSDIAAQTSVQADKDEKTCTECVD LECNSPKDSGCFEASTMTFSNEDQDLLVVKETPVVNAGICVASPGSVTKDANSGSTIIQA SINSPDQFLFHPMSSTSPNEVPSVFESTITPGKDADQNAPLNLSVCSYMQKRRKPISSTF INLVDEENSDISAQIPGSTNFEGLTNGDMLRRIDFGFETSSAENDYPKETNVPRPLATGN TIPVMDKRLQIFCLLCRSPLGRPENNLYLSFSLTVSSKVYLLSLFEERLTSCDSNTPPTV PVIVTDISSVDPRLCNGTLEGDREQGTWREEDGCVFKKVFCPFCSNPNNCLGVQIKAADE KNVQLLNKIMLYHGSVVIGHSEAAGDQAAKDKDLLQVNGSSTKKTTILKSIEKFAYSPKQ TDLGGWRTTKSKLKLSKK NT seq 3657 nt NT seq  +upstreamnt  +downstreamnt atgtctgcagctctcggaactggaaatggagctaaacccagcaaaactcctaacccttac ttcatcaatcccaagaatcccaaaaatgttcaccatattgcagggattccggtggaattc ccatacaagccgtatgggacgcagctttccttcatgtacagagtcatatcaaccctagat cgagctcagaaagacggccattttcatgccttgattgaatcgcccactggtaccggtaaa tcactgtcgcttctttgctccactcttgcttggcagaaaaactataagatcaataacatc aaaggcaatctgtctcaatccatcccggatccagaggccgtcactgatcctctcggtcat ggcggtggttttattcccgaaacacaaccttcaacttcaagcattccttcatcaagcatt tcagagccacctcagaatgaagcgaatagcaagaataagaagaaaatgttggctcctacc atatattatgcttcgaggactcattcacaaatttctcaagtgattcgtgaatacaggaaa acttcttatcgagtgcccatggcaatattggcttcaaggaaacattattgcacaaatcct catgtctccaaggagaatattgatgaagaatgcaagcttctgttgagtcaagaggaagga tgctctgaatttaaaaatatgcataaggtcaaatgtcatccctcagttcagaaaggaggc tgtcatgaggcccatgatattgaagatattgtcaaaattggacaaattgttaaaggatgt gcatactatgctgcacgttcaatggcagatgatgcacaactgattttttgcccgtatagc tacattatcaatcctgttattcgaggggcaatggatgtagatatcaaaggagccattata gttcttgatgaagctcacaatttagaggatattgctcgtgaaggtggtagtgtggatctt gaagaagatgctttgcacaaattgcagatggagcttcatcaactcaagatgatcaaggcc gacgtttaccaaccattgtctgaaatgataatgaacctaataagttggattgagcagaca aagagcaaattagaaggaacaaatgaatctaagcactacttctcctcctggaccggtgac aaggcagtaaggcaactccaagaagctaacatttcacagcaattcttccctgtcttgcta gaatgtgcaacaaaggcaatcagagctgcttcagatacagaatcagatgtacttcattta agtggcatgtctatcataaccttggaaggactgttctcttcactgacatatttcttctca agagatggttctcacgtttttgattatcagcttgctctacaacgatattttaaaaaagat gagaaaaatgcttctggcagttggacatgttcattaggtttgtggtgcttgaacccgtct gttgtattcagagatgtatctgatctttcattatcagtcatcttaacttctgggacacta tcgccaatgaactccttctcatctgaacttggcgtgcagtttggaaactgtttggaggct cctcatgttattgatatcaaatcccaggtatggtctgctgtaatctcccatggcccagac aattaccaattggatgcaagttacaaaacagcggatcaatatgctttccaggactcactt ggcaaatccttggaagaaattttcaagattgttccaggtggctgtctgatattcttccca agttacaagctgatgaagaagcttagtgatcgttggcataacacaggccaatggtctcaa cttaaagcacgaaagcccctttttgttgagccaagagggggtgatcaggaagaatttgag actgttctgaaaggttattataattcagtatctcaagtcaagaaacctaaaaggagaagg ataaaaagaacagatgacaatgtgattgagtctgcagaagttactagccccagaggggcg gcttttcttgcagttttccgaggaaaggtgtcagaaggcatagatttttctgatgataat gctagggtggttatagctgttggcattcccttcccgaatataaatgataaacagatcgag ttaaagaagaaatataataatacttacagatcatctaaaaaccttctgagtggaaatgag tggtactgccagcaagccttcagagctctaaatcaagctcttgggcgctgtatacgccat agatatgattatggagccatcatcctactagattggcgttttcaggatgaaaagaataga gcacatatttcgaagtggctaaggccatccattagaatgtatggaagttttgagaagtca ttggacgagctgagatcctttttcagagaagtcaaggacttggtttccaagaacaagcaa ctatcttctttggcaaaatatgataccacttttccccaaatgaagcctcaaagtgatatt gcagctcagacaagtgttcaagcagataaggacgagaagacctgcactgaatgtgttgat ctagaatgcaactcaccaaaagattcagggtgttttgaggcttcaactatgacgttctcc aacgaagatcaagatttgctcgtggtcaaggaaacgccagttgtcaatgctggtatctgt gtagctagtccaggttccgtaaccaaggatgctaactctggttcaactataattcaggcc tcaatcaactctccggatcaatttctgtttcatccaatgtcttcaacaagcccgaacgaa gttccttctgtttttgaatcaacaatcacccctggaaaggatgcggatcagaacgcacca ttgaatcttagtgtttgttcatatatgcaaaaaaggaggaaacccataagttcaactttt attaaccttgtcgatgaagaaaacagtgatatttctgctcaaattccaggttccacgaat tttgagggactaaccaatggagatatgcttcgcagaattgattttggttttgaaactagt tcagctgaaaacgattatcctaaggagacaaatgttccacggccattagcaactggtaat actattccggttatggataaaagattacagattttctgtttactctgcagaagtccttta ggtcgccctgaaaataatttgtatctcagtttctcactgactgtgtcctcaaaagtctac ttgttatctcttttcgaagagagattaacttcttgtgattcaaatacgccaccaactgta ccagttatagtaaccgatatttcatcagttgatccaagactttgcaatggaactcttgaa ggtgatcgagaacagggcacttggcgtgaagaagacgggtgtgtattcaaaaaggtcttt tgccccttctgcagtaaccctaacaattgtcttggtgtgcaaatcaaagctgctgatgaa aagaatgtgcagttactaaacaagataatgctttaccatggaagtgtggtaattggacat tctgaagcagcaggggaccaggcagcaaaggataaggatttgctacaggtgaatggctca agcacaaagaagactaccattttaaaatccattgaaaaatttgcatattctcccaagcaa acagacttgggaggatggaggactacaaaatcgaagctaaaactttccaagaaatag

DBGET integrated database retrieval system