Gossypium hirsutum (upland cotton): 107905829
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Entry
107905829 CDS
T04793
Name
(RefSeq) protein transport protein Sec61 subunit alpha
KO
K10956
protein transport protein SEC61 subunit alpha
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03060
Protein export
ghi04141
Protein processing in endoplasmic reticulum
ghi04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
107905829
04141 Protein processing in endoplasmic reticulum
107905829
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
107905829
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107905829
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ghi02044
]
107905829
Membrane trafficking [BR:
ghi04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
SEC61 complex
107905829
Secretion system [BR:
ghi02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
107905829
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecY
Plug_translocon
Motif
Other DBs
NCBI-GeneID:
107905829
NCBI-ProteinID:
XP_016688085
UniProt:
A0A1U8JCP7
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Position
D05:13701638..13705546
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AA seq
476 aa
AA seq
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MGGGFRVLHLVRPFLSFLPEVQSADRKIPFREKVICTVVSLFIFLVCSQLPLYGIHSTTG
ADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNSVREDRALLNGAQK
LLGILIAVGEAVAYVLSGMYGSVSQLGVGNAILIIIQLCFAGIIVICLDELLQKGYGLGS
GISLFIATNICENIIWKAFSPTTINSGRGAEFEGAVIAMFHLLITRTDKVRALREAFYRQ
NLPNVTNLLATVLIFLIVIYFQGFRVVLPVRSKNARGQQGSYPIKLFYTSNMPIILQSAL
VSNLYFISQLLYRKYSGNFFVNLLGKWKESEYSGGQFIPVGGLAYYVTAPASLADMAANP
FHALFYLVFMLSACALFSKTWIEVSGSSAKDVAKQLKEQQMVMPGHRDSNLQKELNRYIP
TAAAFGGMCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFGL
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgggaggagggttcagagtactgcatctggttagaccatttctttcatttctgcctgag
gttcagagtgctgacaggaaaattccttttagagagaaggtcatctgcactgtcgtctcc
ctcttcatctttttggtgtgcagtcagcttccactatatggaatacactctacgacaggt
gctgatcctttctattggatgcgtgttatccttgcatcaaaccgtggaactgttatggaa
cttggtattacccccattgtgacatctggattggtgatgcaactcctggctggttcaaaa
atcatcgaggtggacaacagtgttcgtgaggatcgagcactcctaaatggggctcaaaag
ttgttgggcatcctgattgctgtcggtgaggcagtggcatatgtactgtcaggtatgtat
ggcagtgtcagtcagcttggtgttgggaatgctatcctaattattattcaactttgcttt
gctggaatcattgtgatctgcctggatgaacttctccagaagggatatggtttgggctct
gggatctcccttttcatagccactaatatctgtgaaaacataatttggaaggcctttagt
cctacaactatcaatagtggtcgaggggctgagtttgaaggtgctgtcattgctatgttc
catctattgataactaggacagacaaagttcgagcacttcgcgaagctttttatcggcag
aatcttcctaatgttacaaatttactcgcaacagtattgatcttccttattgtcatctac
ttccaaggtttccgtgttgttttgcctgtaagatcaaagaatgctcgtggacagcaagga
tcttatcccattaagctattctacacctcaaacatgcctatcatcctgcagtctgcactt
gtttcaaatctttatttcatctcccagttgctgtacaggaagtacagtggtaacttcttt
gtgaatctgttgggtaaatggaaggaatctgaatattcaggcggtcaattcattcctgtg
ggaggtttagcatactatgttactgcacctgcaagcttagcggacatggcagcaaatccc
ttccatgctctattttatcttgtgttcatgctttcagcatgtgcgttgttttcgaaaact
tggattgaagtttcaggttcttctgccaaagatgtggctaagcagctcaaggaacaacaa
atggtgatgcctggacatagagattcaaatctacagaaggaactgaatcgctacattcca
actgcagctgcgtttggaggaatgtgcattggtgcattaactgtcctagccgacttcatg
ggagcaattggttcgggtactggaatattgcttgccgtaacaatcatatatcaatacttt
gaaacttttgagaaagagagagccagtgaactgggtttctttggactctga
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