Gossypium hirsutum (upland cotton): 107905928
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Entry
107905928 CDS
T04793
Name
(RefSeq) starch synthase 3, chloroplastic/amyloplastic
KO
K00703
starch synthase [EC:
2.4.1.21
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00500
Starch and sucrose metabolism
ghi01100
Metabolic pathways
ghi01110
Biosynthesis of secondary metabolites
Module
ghi_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
107905928
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ghi01003
]
107905928
Enzymes [BR:
ghi01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.21 starch synthase (glycosyl-transferring)
107905928
Glycosyltransferases [BR:
ghi01003
]
Polysaccharide
Storage polysaccharide
107905928
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_5
CBM53
Glyco_transf_4
Glycos_transf_1
Glyco_trans_1_4
Glyco_trans_4_4
DUF3592
Motif
Other DBs
NCBI-GeneID:
107905928
NCBI-ProteinID:
XP_016688215
UniProt:
A0A1U8JD48
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Position
D05:15392087..15401157
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AA seq
1162 aa
AA seq
DB search
MDVSLQLQRPLRFKEVLNHRTDCFKIRSFLGSLSFAGTIQFTPWRCECLPSRVSLRVTAG
AADFSKRRQRRLSTRSSKSSKGFGRKTKLGTGNQKRDLKDNGENEDSNIPTLSESEESNQ
TEMESTVAVDEESTIALYQKNKVNESEKEELKEDVPSKTKSYLNAENGSARKVVEDVLGL
QKKELNLENDTVSTSRDAAAYEGKHFTDYAITEEKHLAGTETDGTVTGKDEKTIEDASAK
LKLEMEEKLRKQEIERLAEGNFLKGNKIFVYPQTVRPDEDIEVFFNRSFSTLNDEKDILI
MGAFNDWRWRSFTMRLNKTYFKGDWWSCQIHVPKEAYKMDFVFFNGQNIYDNNDKQDFCI
IVEGGMDVFAFEDFLLEEKRRELEKLAKEQAEKERQEEEQRRIEAEKAASEADRAQAKVE
TGKRREILEQLMKQAPRSVDNIWFIEPNEFKGADKVKLYYNKTSGPLAHANELWIHGGHN
NWCNGLTIVEKFLRSGREGGDWWYAEVVVPGRALVLDWVFADGPPKVATIYDNNNYQDFH
AVVPKSIPEEMYWVEEEHQIFRKLQAERKLREEAIRAKAEKTARMKAEMKERTLKRFLLS
QKHIVYTEPLDIHAGSTVTVFYNPANTVLNGKHEIWFRCSFNCWTHRMGPLPPQRMLPAD
NGSHVKATVKVPLDAYMMDFVFSEREDGGMFDNKGGMDYHIPVFGGIVKEPPMHIVHIAV
EMAPIAKVGGLGDVVTGLSRAVQDLNHNVNIILPKYDCLNLSHVKDLHYQKSYSWGGTEI
KVWFGKVEGLSVYFLEPQNGFVWTGCVYGCKNDAERFGFFCHAALEFLHQGGLQPDIIHC
HDWSSAPVAWLFKDHYMHYGLSKTRVVFTIHNLEFGAHFIGKAMAYADKATTVSHTYSKE
VAGNPAVAPHLHKFHGILNGIDLDIWDPYNDKFIPVPYTSENVVEGKRAAKEALQQRLGL
KKSDHPLVGIITRLTHQKGIHLIKHAIWNTLKRNGQVVLLGSAPDPRIQNDFVNLANQLH
SSHSDQARLCLTYDEPLSHLIYAGAYFILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLY
DTVFDVDDDKARAEAQGLEPNGFNFDGADGAGVDYALNRAISAWYDGRDWFNSLCKRVME
QDWSWNRPALDYMELYHAAKKY
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgtctttgcaattgcaaagaccgttgagattcaaagaggtgcttaaccacagg
actgactgcttcaaaatcagatcctttcttggttccttgtcttttgcgggaactatacag
tttactccatggcgttgtgagtgtcttcccagcagagtttcgcttagagttacggctggt
gcagctgatttttcaaagaggagacaaagaagattgtctacccgaagctctaaaagttcg
aagggttttggccggaaaacaaaattaggaacaggcaaccagaagagggatctaaaggat
aatggtgagaatgaggattcaaacattccgacattgagtgagtctgaagagtctaaccag
acagaaatggaatcaacagttgctgttgatgaagaatcaaccattgcactttatcaaaag
aataaggtaaatgaaagtgaaaaggaagagttaaaagaggatgtaccatcaaagaccaaa
agctacctgaatgcagaaaacggaagtgcaaggaaggttgttgaagatgttctggggtta
cagaagaaagaattaaatttggaaaatgatactgtgagtacatcaagagatgctgcagcc
tatgaaggaaagcatttcactgattacgctattactgaagagaagcatttggctggtaca
gaaactgatggaactgttaccggaaaggatgagaaaacaattgaagatgcttcggcaaaa
ttgaagttggagatggaagaaaaattgcgtaaacaggaaattgagcgccttgctgagggc
aacttcttgaaggggaacaaaatttttgtttatcctcagacagtaagaccagatgaagac
atagaagtgttctttaataggagtttctccactttaaatgatgagaaagatattctaatc
atgggagccttcaatgattggcgatggagatcattcactatgaggttgaataagacttat
ttcaaaggggattggtggtcttgccagattcatgttccaaaggaagcttacaagatggat
tttgtgttctttaatgggcagaatatctatgacaataacgacaaacaggatttttgcata
attgtggagggtggaatggatgtgtttgcatttgaagatttcttgcttgaagagaaaaga
agggaactagagaaacttgcaaaagagcaggcagaaaaggaaaggcaagaagaagagcaa
agaagaatagaagcggagaaggctgcaagcgaagcagatagagcacaagcaaaggtggag
actggaaagaggcgagaaatattggaacaattgatgaaacaggctccgagatcagttgat
aacatttggttcatagaacctaacgaattcaaaggggcagacaaggtcaagttatattat
aacaaaacttcaggccctcttgctcatgccaatgagctttggattcatggaggacataat
aattggtgcaatggattaacaattgttgaaaagtttctcaggtcaggtagagagggtggg
gattggtggtatgcagaagttgttgtacctggtcgtgcccttgtgttagactgggtattt
gctgatggaccacctaaggttgccactatatatgataacaacaattatcaagacttccat
gctgttgtcccgaaaagcattcctgaagagatgtattgggttgaggaagaacaccagata
tttaggaagcttcaagcagagaggaaactaagagaggaggccattcgcgccaaggcggaa
aaaacagcacgtatgaaggctgaaatgaaggaaagaacattgaagagatttctgctttcc
caaaaacatatagtttataccgagcctcttgatattcatgcaggaagcactgttacagtt
ttttacaatcctgctaacacagttcttaatggaaaacatgaaatatggttcagatgttca
tttaactgttggactcaccgtatgggtcctttaccacctcagagaatgttgcctgcagat
aatggttcgcatgtaaaagccactgtcaaggttccattggatgcatatatgatggacttt
gtattctctgagcgggaagatggtggaatgtttgacaacaaaggcggtatggattaccat
atacctgtttttggaggaattgtgaaagagccacctatgcacattgtgcatattgctgtt
gagatggccccaattgcaaaggttggaggccttggcgatgttgttacgggtctctctcgt
gctgttcaagatttaaaccacaatgtgaacatcattcttccaaagtatgactgcttgaac
cttagccatgtgaaggacctacattaccaaaaaagctattcttggggtggcactgaaatt
aaagtttggtttggtaaagtggaaggcctttcagtttattttctggagccacaaaatgga
tttgtttggactggttgtgtttatggttgcaaaaatgatgcagagaggtttggcttcttt
tgtcatgctgctctagaatttctacaccaaggtggacttcagcctgatatcatccattgc
catgactggtctagtgccccagttgcatggctatttaaggaccattacatgcattatggt
cttagcaaaactcgggttgtcttcaccatacataaccttgaatttggagcacatttcatc
ggaaaggctatggcatatgcagacaaggctacaactgtatcccacacctactcaaaggag
gttgctggaaatcctgcagtagctcctcatcttcacaagttccatggaatattaaatgga
attgacttagatatttgggatccgtacaatgataagttcattcctgtaccttacacttca
gaaaatgttgttgaaggcaaacgagctgccaaggaagccttgcagcaaaggcttggtttg
aagaaatctgatcatcctttggttggaatcattactcgcttaactcaccagaaaggaatc
catcttatcaagcatgcaatttggaacaccttaaaacgcaatggacaggttgtattgctt
ggctcagctcctgatcctcgcatccaaaatgattttgtgaatttggccaatcagctgcat
tcatctcattcggatcaggctcgcctttgtttgacctatgatgaacctctttctcacttg
atatatgctggtgcctatttcattctagttccatcaatttttgagccttgtggactgacg
caattgacagcaatgagatatggctccatacctgttgttcgtaaaacaggaggactttat
gatactgtattcgatgttgacgatgataaagctagagctgaagcacaaggtcttgaaccc
aacggatttaacttcgatggagctgatggtgctggagtcgattatgccctcaatagggct
atctctgcttggtatgatggtcgggactggtttaactcattgtgcaagagggtgatggag
caagactggtcttggaaccggcctgcgcttgattatatggagctgtatcatgcggcaaag
aaatactaa
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