Gossypium hirsutum (upland cotton): 107905980
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Entry
107905980 CDS
T04793
Name
(RefSeq) auxin response factor 6 isoform X1
KO
K14486
auxin response factor
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
107905980
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GFIT
Motif
Pfam:
Auxin_resp
B3
AUX_IAA
PB1
Motif
Other DBs
NCBI-GeneID:
107905980
NCBI-ProteinID:
XP_016688274
UniProt:
A0A1U8JIY8
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Position
D05:12928923..12935947
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AA seq
907 aa
AA seq
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MRLSSAGFSPQAPEDFAGEKRVLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAAST
NKEEVDVHVPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLNPQEQKEAYLPAEL
GTPSRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNE
WKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMP
SSVLSSDSMHLGLLAAAAHAALTNSRFTIFYNPRASPSEFVIPLTKYIKAVYHTRVSVGM
RFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGDRQPRVSLWEI
EPLTTFPMYPSPFPLRLKRPWPAGLPSFHGIKDDGLGMNSPLMWLQGDAGRGMPSLNFPG
IGVTPWMQPRLDAASMLGLQTDIHQAMAAAALQEMRAVDPSKSATTTLLQFQQPQNLSCR
PAALMQSQMLQQSQPQAFLQGVEDNQHQSQTQAQTQPPLVQQQLQQQNSFNNHQHQQQLQ
HPLSQQHQQLVDHQHISTGVSAMSQYTPASQSRSSPFQAIPSLCQQQSFSDSNGHTMTSP
IISPLHGLLGSFPQDESSSLLNLPRSNPVITSAAWPSKRAAVEVLSSGSPQCVLPQVEQL
GPTQTNISHNSISLPPFPGRECSIDQAGGTDPQSHLLFGVNIEPSSLLLQNGMSSLRGVG
SESDSTTIPFSSNYASTAGTDFSVNPAMTPSSCIDELGFLQSPENAGQENPQTRTFVKVY
KSGSFGRSLDISKFSSYNELRSELARMFGLEGQLEDPLRSGWQLVFVDRENDVLLLGDDP
WPEFVNSVWCIKILSPQEVQQMGKRGLELLNSVPVQRLSNGSCDDYASQQDSRNLSSGIA
SVGSLDY
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgaggctttcttcagctggtttcagtccacaagctccggaagactttgcaggagagaag
agagttctgaactctgaactttggcatgcatgtgcgggtcctcttgtttctctacctcca
gttggaagtagggttgtttacttcccacagggtcatagcgaacaggtagctgcatcaacc
aacaaggaggaagtggatgtccacgtacctaactacccaagcttacctccacaacttata
tgtcagctccataatgtcactatgcatgcagatgttgagacagatgaagtatatgcacaa
atgacattgcaaccactgaatccgcaagaacagaaggaggcttaccttccagcagaattg
ggcactcccagcagacagccaacaaattatttctgtaaaacattaacagccagtgacaca
agcactcatggagggttctctgttcctcgccgagctgctgaaaaagtgtttcccccactg
gacttctcccagcagcctcctgctcaagagttgattgcaagggacttacacgataatgaa
tggaaatttaggcatatatttcggggtcagcccaaaaggcacctcttgacaacaggatgg
agcgtatttgtaagtgctaaaagactagttgcaggtgattcagttctttttatctggaat
gaaaaaaatcaattacttcttggcatccgacgagctaatcgacctcaaactgtaatgcct
tcatctgttttatcaagtgatagcatgcacttagggcttcttgctgccgctgctcatgca
gctttaacaaatagccgcttcactatattttataacccaagggctagtccatcagaattt
gtaatacctttaacaaaatatatcaaagctgtctatcatactcgagtttctgttggtatg
cgctttagaatgctgtttgaaacagaagaatcaagtgttcgccgatacatgggtacaatc
actggcataagtgacttggatcctgtccggtggccaaattcacattggcgatcagtcaag
gttggctgggatgaatcaacagctggagacaggcagcctagagtctccttgtgggagatt
gaaccattgacaacattccctatgtatccatcaccatttccattaagacttaagcgacca
tggccagcaggattaccttctttccacggcatcaaggatgatggtctaggcatgaattct
ccacttatgtggctacaaggagatgcaggtagaggaatgccatctctgaattttccaggg
attggagttacaccgtggatgcagccaaggctggatgctgcttccatgctgggtttgcag
actgacattcaccaagctatggctgcagctgcgctgcaagaaatgagagcagtggatccc
tccaaatcagcaactactacccttctgcaattccagcaaccccaaaatctatcctgcagg
cctgctgctttaatgcagtcccagatgttgcagcagtctcagcctcaggcttttcttcag
ggtgttgaagataaccaacatcagtctcagactcaggctcaaacccaaccgcctcttgtt
cagcaacaattgcagcagcagaattcatttaataaccatcaacaccaacagcagttacag
catccgctgtcacagcaacaccagcaactggtcgatcatcagcatatttctactggagtg
tctgccatgtcacagtatactccggcctcacagtcccggtcgtcacctttccaagccata
ccttcactatgccaacaacagagtttttctgactcaaatgggcacaccatgaccagccct
attatatctcccttgcatggtcttttgggatcctttccccaagatgaatcgtccagtctg
ctcaacttgcctagatccaacccagtaataacatctgctgcatggccatctaagcgggct
gctgttgaagttctgtcatctggatctccacaatgtgttctgccccaggtggaacagttg
gggcccacccaaacaaacatttctcataattctatttcgttgccaccctttcctggcagg
gagtgctcgatagaccaagcagggggtactgatccacagagccatctcttatttggtgtt
aatatagagccttcatctcttctattgcaaaacgggatgtcaagccttaggggagttggc
agcgagagtgactccactaccatacccttctcttctaattatgcgagtactgcaggcact
gatttttcagttaatccagcaatgacaccttccagttgcattgatgaattgggattcttg
cagtctccagagaatgcgggccaagaaaacccacaaactagaacctttgttaaggtttat
aaatcagggtccttcgggaggtcgttggatatctccaaatttagcagctacaatgagctg
cgcagtgaactcgctcgcatgtttggccttgaaggccagttggaggaccctttgagatca
ggctggcagcttgtatttgttgatcgggagaatgatgttcttctccttggtgatgatcct
tggccggagtttgtgaacagtgtgtggtgcatcaagatactttcaccgcaagaagtgcag
caaatgggcaaacgaggcctggagcttctaaactctgttccagttcagaggctctcgaat
ggcagttgtgatgactatgcgagccagcaggactcgagaaatttgagctctggtattgcg
tctgtggggtcattggactactga
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