Gossypium hirsutum (upland cotton): 107906010
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Entry
107906010 CDS
T04793
Name
(RefSeq) ras-related protein RABF2b
KO
K07887
Ras-related protein Rab-5A
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04144
Endocytosis
ghi04145
Phagosome
ghi04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
107906010
04145 Phagosome
107906010
04148 Efferocytosis
107906010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107906010
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ghi04147
]
107906010
04031 GTP-binding proteins [BR:
ghi04031
]
107906010
Membrane trafficking [BR:
ghi04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
107906010
Endosome - Lysosome transport
107906010
Exosome [BR:
ghi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
107906010
Exosomal proteins of other body fluids (saliva and urine)
107906010
Exosomal proteins of colorectal cancer cells
107906010
Exosomal proteins of bladder cancer cells
107906010
GTP-binding proteins [BR:
ghi04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
107906010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
RsgA_GTPase
Gtr1_RagA
MMR_HSR1
PNKP_ligase
ABC_tran
TsaE
Motif
Other DBs
NCBI-GeneID:
107906010
NCBI-ProteinID:
XP_016688330
UniProt:
A0A1U8JDI1
LinkDB
All DBs
Position
D05:12630165..12632916
Genome browser
AA seq
200 aa
AA seq
DB search
MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK
FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPGMVMAL
AGNKVDLLDARKVAAEEAQTYAQENGLFFKETSAKTASNVNEIFYEIAKRLPRVQPAQNP
AGMVLMDRPAERSASATCCS
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggccaccactggaaacaagaacatcaatgctaaattagttctacttggggatgttgga
gctggaaagtctagtcttgttttgcgcttcgttaaagggcaatttgttgaatttcaggaa
tcaaccataggtgcagcttttttctcccaaacattggctgtgaatgatgcaactgtgaag
tttgagatttgggatacagctggtcaagagaggtaccatagcttggcaccaatgtattac
agaggagctgcggctgctatcattgtgtatgatattacaaatcaagcatcatttgagaga
gccaaaaaatgggtccaagaacttcaagcacaaggcaatcctggtatggtaatggcactt
gctgggaacaaagttgatttactagatgcaaggaaggtggcagcagaggaagcacaaact
tatgctcaggagaatggtcttttcttcaaggaaacatctgcaaagacagcatccaatgtc
aatgagattttctacgaaatagccaaaagattacctcgagtgcagccagcacaaaatcct
gctggaatggttctcatggatagacctgcagaacggagtgctagtgccacttgttgctct
tag
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