Gossypium hirsutum (upland cotton): 107906057
Help
Entry
107906057 CDS
T04793
Name
(RefSeq) oligouridylate-binding protein 1B
KO
K13201
nucleolysin TIA-1/TIAR
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107906057
03041 Spliceosome [BR:
ghi03041
]
107906057
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
107906057
Spliceosome [BR:
ghi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
107906057
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_PARP14_3
RRM_7
RRM_5
RRM_DEAH11
Motif
Other DBs
NCBI-GeneID:
107906057
NCBI-ProteinID:
XP_016688392
UniProt:
A0A1U8JDK4
LinkDB
All DBs
Position
D05:complement(12188007..12193366)
Genome browser
AA seq
422 aa
AA seq
DB search
MQHLRLKQQQQALMQQALLQQQSLYHPGILAPPQIEPIPSGNLPPGFDPSTCRSVYVGNI
HSQVTEPLLQEVFASTGPVEGCKLIRKEKSSYGFVHYFDRRSAALAILSLNGRHLFGQPV
KVNWAYASGQREDTSGHFNIFVGDLSPEVTDAMLYACFSVYHSCSDARVMWDQKTGRSRG
FGFVSFRSQQDAQSAINDLSGKWLGSRQIRCNWATKGAGSNDDKQSSDAKSVVELTNGSS
EDGKETTNNEAPENNPQYTTVYVGNLAPEVTQLELHCHFHALGAGVIEEVRVQRDKSFGF
VRYSTHAGAALAIQMGNTQSFLCGKQIKCSWGSKPTPPGTSSNPLPPPAAAPLPGLSAID
LLAYERQLAMSKMGGVHALMHPQGQHPLKQAAIGVGAAGASQAIYDGGFQNVAAAQQLLY
YQ
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgcagcacctgaggctgaagcaacagcaacaagccctgatgcaacaagctctcctccaa
caacagtctctctatcaccctggcatcttagctcctccacagatagagccaatcccaagt
ggaaatctgcctcctggttttgatccaagtacttgccgcagtgtgtatgtgggaaacatc
cattcacaagtgactgaaccactacttcaagaggtttttgcaagtacaggtcctgttgaa
ggttgcaagcttatcagaaaggaaaagtcatcatatggattcgtccactactttgatcgt
cgatcagctgctctcgctatattgtctctaaatggaaggcatttatttggacagcctgtc
aaggtcaattgggcatatgctagtggtcagagagaggatacatcaggtcattttaacatt
tttgtaggggatctcagtcctgaggttactgatgcaatgctgtatgcatgcttttctgtc
tatcacagttgttcggatgcgagggttatgtgggatcagaaaactgggcgttcaagagga
tttgggtttgtttcattccgcagtcagcaggatgcacaaagcgcaattaatgacttaagt
ggaaagtggcttggcagtcgacagatccgttgtaactgggcaacaaaaggtgctggtagc
aacgatgacaagcaaagctctgatgccaaaagtgtcgttgaacttaccaatggttcatca
gaggatggtaaagagaccaccaataatgaggctcccgagaataatcctcaatatactact
gtttatgtgggcaatcttgctccagaggtcacccaacttgaactccactgtcacttccac
gcacttggtgctggggtgattgaggaggttcgggtccagcgtgacaaaagctttggcttt
gtgagatacagtactcatgctggggcagctttggctattcagatggggaacactcagtca
tttttatgtggcaagcaaattaagtgctcttggggcagcaaacctacaccaccggggaca
agttcaaacccacttcccccacctgcagctgcacctttaccgggcctttcagcgattgac
ctattagcttatgaaaggcaacttgccatgagcaaaatgggtggcgttcatgctctaatg
caccctcagggacagcatcctctgaagcaagcagcaattggagtgggtgctgctggagca
agccaggctatatatgatggtgggttccagaatgttgctgctgcccagcagctattgtac
tatcagtaa
DBGET
integrated database retrieval system
