Gossypium hirsutum (upland cotton): 107906062
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Entry
107906062 CDS
T04793
Name
(RefSeq) 25.3 kDa vesicle transport protein isoform X1
KO
K08517
vesicle transport protein SEC22
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04130
SNARE interactions in vesicular transport
ghi04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
107906062
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
107906062
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107906062
Membrane trafficking [BR:
ghi04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Sec22
107906062
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GFIT
Motif
Pfam:
Longin
Synaptobrevin
Motif
Other DBs
NCBI-GeneID:
107906062
NCBI-ProteinID:
XP_016688404
UniProt:
A0A1U8JJC5
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Position
D05:12165508..12168864
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AA seq
218 aa
AA seq
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MVKMTMIARVTDGLPLAEGLDDGRDLVDAEMYKQQVKALFKNLSKGHNEASRMSIETGPY
VFHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNGAQIETAARPYAFIKFDTFI
QKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSQMSSRLTSESRI
YADKARDLNRQALIRKWAPVAIVLGVVFLLFWVKAKLW
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atggtaaagatgacaatgattgcccgtgttactgatggtcttcctcttgcggagggacta
gatgatggtcgtgatctggtagatgctgaaatgtacaaacagcaagttaaggctttattt
aagaatctctccaaaggccataatgaggcttcaaggatgtctattgaaaccggcccatat
gtattccactatatcattgaaggacgtgtttgttacttgacaatgtgcgatcgatcttat
cctaagaaacttgcctttcaatatctggaagacctcaagaatgaatttgagcgtgttaat
ggagctcaaattgaaacggctgccaggccttacgcctttataaaatttgacacattcata
cagaagacaaaaaagttgtaccaggacacccgtactcaacggaatattgcaaagttgaat
gatgaactctatgaagttcaccaaataatgactcgcaatgtacaagaagttctcggtgtt
ggcgaaaagttggaccaggtcagccaaatgtccagtcgtttgacatcagaatctcgcata
tatgctgacaaggcaagagatttaaatagacaggctttgattcgaaagtgggctcctgtt
gccattgtgttgggagttgtgttcctcctcttctgggtgaaagcaaagttatggtga
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