Gossypium hirsutum (upland cotton): 107906082
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Entry
107906082 CDS
T04793
Name
(RefSeq) indole-3-acetic acid-amido synthetase GH3.17-like
KO
K14487
auxin responsive GH3 gene family
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
107906082
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Motif
Pfam:
GH3
GH3_C
GH3_M
Motif
Other DBs
NCBI-GeneID:
107906082
NCBI-ProteinID:
XP_040938129
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Position
A11:118409667..118412078
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AA seq
564 aa
AA seq
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MAGESEIKETYENGTKILEDLTNNAHELQEQMLEEILRRNAGTQYLSRFFPSGQADKQNF
KTNVPIVTYEDIKPYIDRIANGETSSGTSGGQQKLIPITTESFEKGWYHHFLADIVIEKC
FSVSDEGKSLSLYFSKPDMETPSGLVASPYMTFYSKTNIFKTRLAKFCLSPIETILCLDN
KQSMFCQLLTGLLQRDKVVWLASNFASVLARTIKFLEDYWRELCCNIRTGYLSDWIIDPG
CKNAMSLILTRPNPELADLIQQICEDQSWEGVIKKLWPKIKYIRSVCTGSMSQYIPLLEF
YGGGIPLVSPSYVSSEACFGINLKPLSNPFDVSYTFLPNTAYFEFLRVNKDGGGKAQETR
TIDKPVDLANVKLGQYYEVVVTTLAESDVLKVTGFYNKSTQFQFVERQNVVLSIDADKTT
EEDLLKAITNAKLILEPFGIMLTAYSSYSDTSSTPGRYVLFWELKMKDSNDLPKLDVKIM
EQCCCIVEESFDFTYKSLRKGGAISGLELRVVKRGSFDELMDFYISKGASISQYKPPYCL
KSEEAIKILNSGMVGKFFGPKTMS
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggctggtgagtcagaaataaaagaaacatatgaaaatggcacgaaaatattggaagat
ttaaccaacaatgctcatgaactacaagaacaaatgttggaggaaatattaaggagaaat
gcaggaacacaatatctaagcagattcttccccagtggccaagcagacaagcaaaacttc
aaaacaaatgttcccattgttacttatgaagatatcaagccttacatagatcggattgcc
aatggagagacctcttctggtacttctggggggcagcagaagttaatacctatcacaact
gaaagttttgagaaagggtggtatcatcattttctggctgacattgtgattgaaaaatgt
tttagtgtctcagacgaaggcaaatcattgtccctatattttagcaaaccagatatggaa
actccatctggattagtagcatcgccctacatgacattctattccaagaccaatattttc
aaaactagactggctaagttttgcttaagtcctattgagaccatcttatgtttggacaac
aagcaaagtatgttttgccaattgcttaccggtttactgcagcgcgacaaggtcgtatgg
ttagcttcgaactttgcatcagttttggcgaggaccatcaagttcttggaagattattgg
agagaattatgttgtaacattagaacaggttacctcagtgattggattattgaccctggt
tgcaaaaatgccatgtcattgatccttactaggccaaaccccgaattggctgatttgatt
caacaaatatgtgaagatcaatcttgggaaggtgtcataaagaaactttggcctaaaatc
aagtatattcgttccgtctgtacaggtagcatgagccaatatattccattacttgaattt
tatggaggagggatccctttagtttcaccaagttatgtttcttcggaagcttgttttggg
atcaatttgaaacccctaagcaatccctttgacgtctcttacacctttctcccaaatacg
gcttacttcgaatttctccgtgtgaacaaagatggtggaggaaaggctcaagaaactagg
actatagacaaaccggtcgatcttgcgaatgtgaagcttggtcaatactacgaagttgtt
gtcacaactttggcagagtcggatgttctgaaggtgaccggattctataataaatctaca
cagtttcaatttgtagaacgacagaatgtggttttgagtatagatgcagacaaaacaact
gaagaagaccttttgaaagcaatcacgaatgcaaaactcatcctcgaaccatttggcatc
atgttgactgcatacagtagctattccgacacctcgtcgacaccgggtcgatatgtatta
ttttgggagctgaagatgaaagacagcaatgatttaccaaaacttgatgtcaagataatg
gaacaatgctgctgtatagtggaagaatccttcgattttacatataaatcacttaggaaa
ggtggtgcaatttcaggtttagagctaagggtggttaaacgtggaagctttgatgaactc
atggatttctatatatcaaagggagcttccatttctcaatacaagccaccttattgcctt
aaatctgaggaagccataaagatattgaattcagggatggtggggaagtttttcggcccc
aaaactatgtcttaa
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