Gossypium hirsutum (upland cotton): 107906126
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Entry
107906126 CDS
T04793
Name
(RefSeq) protein HEADING DATE 3B
KO
K12125
protein EARLY FLOWERING 3
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
107906126
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Gene cluster
GFIT
Motif
Pfam:
MSSP
Motif
Other DBs
NCBI-GeneID:
107906126
NCBI-ProteinID:
XP_016688495
UniProt:
A0A1U8JDZ7
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Position
D05:11614684..11618492
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AA seq
731 aa
AA seq
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MMMRRRKDEAKVMSPMFPRLHVNDTEKGGPKAPPRNKMALYEQLSIPSQRFNSALPLPPN
KTNSLVPSISSRHGEGNESSMFMPFENSREPSSLAEKFHSYSIHGAKISSTKENQHNQFP
KATDYHSLDTTPSTPAVCKSTFLSPHFSNLKKFSPRKLGHDDDLRVPTSVLSGIDRSCSC
NKHGEDQECFPELNLSSSMQLQSANEISVGSKSKRYVENQAEENGRLFRSNQDLADTSSN
LSTKMKNSKSLKRPHNSCNKENKISSVDILNGEVHANTWLHHESGRSLENASTVRNKSCS
RQSLGVDNGSLNALETRYKTHEENNPGTPQVRGLNRHNKVPSTSMMESVSFLNMCPDDIV
GIIGQKHFWKVRRAIIDQQRIFAMQVFELHRLIKVQRLIAGSPKILLEDTYYMGKLSLDV
SPFKKLPSDNVSEPPLIVKIRDRSQKPNIGIEYADENAIAKLPHPSANGDTNKGLLTQRP
KYGPYSGNLLSTSRATNTGSSSPWGFSPPGSQWLVPVMSPSEGLVYKPYAGPCPPTAGIL
APVYGSCGPLNLATGGGDFLSSTYGVSASYQQGFGILPGNPPIGQTYFPHYGTPVRNPSV
SGSVVEQMSPFTGVKSMGNRLSTGDVNFTIAQQSSCNMSSQMSQAISFCVTKLPASKESE
IQASTASSPSERTKGDALPLFPTKPTTQACTHKADTSGQQTRVIKVVPHNRKLATESAAR
IFQSIQEERKH
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgagaagaagaaaagatgaggcaaaggtgatgagtccaatgtttcctaggctt
catgtgaatgatacagagaaaggggggccaaaggcacctccacggaacaaaatggctctc
tatgagcaactcagtatcccttcccaacggttcaactcagcactcccacttcccccaaat
aagaccaacagcttggttccttcaatatcatcaagacatggtgaaggtaatgaaagtagt
atgtttatgccattcgaaaactcccgtgaaccttcaagtttggctgagaagttccattcc
tattccatccatggggctaaaataagtagcacaaaagaaaatcaacataatcaattcccc
aaagctactgattaccatagtttggataccactccatcaactcctgcagtttgtaaaagt
acatttctatctccccacttctccaacttaaagaaattttctccaaggaagctagggcat
gatgatgaccttagggttcctacctctgttctgtccggaatagatcgaagctgcagttgc
aataagcacggtgaagatcaggaatgtttccctgaattgaacttgagttcttcaatgcaa
cttcaaagtgctaatgaaatttctgtaggttcaaagtctaaaagatatgttgagaaccaa
gctgaggagaatggaagattgtttcgaagcaatcaagacctggctgatacatcatccaac
ctgtcaaccaaaatgaagaactcaaaatcgttaaaacgtccccataattcctgtaacaaa
gaaaacaaaatcagctcagtggatatactaaacggtgaggttcatgcaaatacttggttg
catcatgaatctggcagatctctggaaaatgcttccactgtgagaaacaagtcatgctcc
agacaatcacttggagttgataatggcagtctgaatgcgcttgaaaccagatataaaact
catgaagaaaataatcctgggacaccgcaagtcaggggtctaaacagacataataaggtc
ccaagtacctccatgatggagtctgtatcttttttgaatatgtgccctgatgatattgtg
ggaataataggtcaaaagcatttctggaaagtacgaagagctattatcgaccaacaaaga
atctttgccatgcaagtcttcgagttgcatagattaataaaggttcagaggttgattgct
gggtcaccaaagatattgcttgaagatacctattatatgggcaaactatctttagatgtt
tctccattcaagaagttgccatctgacaatgtttctgaacctccattgattgttaaaatc
agagatcgttctcaaaaaccaaatattggcattgaatatgcagatgagaatgcaattgca
aagcttccccatccttctgccaatggtgataccaacaaaggacttcttacacagcgacca
aaatatgggccttactcaggaaatctcttgtcaacatcaagggccacgaataccggatca
tcatctccttggggtttttctccacctggaagtcagtggttagttcctgtaatgtctcct
tccgagggacttgtctacaagccatacgcagggccttgtcctccaactgcaggtatcttg
gcaccggtttatggcagctgtggtcctctgaacctagccacgggaggtggggactttctg
agctcaacttatggtgtttctgcttcttaccagcagggatttgggattctccctggcaac
cctcccataggtcagacctattttccacattacggcacgccagttaggaatccatcggtt
tccggctcagtagttgagcagatgagcccgtttactggagtcaaatcaatgggcaatcga
ttatcaacaggtgatgtgaacttcaccatagctcaacagagttcatgcaacatgtcaagt
cagatgagtcaagcgatctcattttgtgttacaaaactgcctgcgtcgaaagagagcgaa
atacaggcaagtacagcaagtagtccctctgagaggacaaaaggggatgcacttcctctt
tttccaaccaaacccacaactcaggcatgtactcacaaagctgatactagtgggcagcaa
acacgggtaattaaggttgtaccgcataaccgcaaattagcaaccgaatcagcagctcgg
atcttccagtctatacaagaagaaagaaaacattaa
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