KEGG   Gossypium hirsutum (upland cotton): 107906180
Entry
107906180         CDS       T04793                                 
Name
(RefSeq) RING-H2 finger protein ATL74-like
  KO
K19040  E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:2.3.2.27]
Organism
ghi  Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ghi04121]
    107906180
Enzymes [BR:ghi01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     107906180
Ubiquitin system [BR:ghi04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   ATL proteins
    107906180
SSDB
Motif
Pfam: zf-RING_2 zf-RING_11 zf-C3HC4_2 zf-rbx1 zf-C3HC4 zf-RING_5 zf-RING_UBOX zf-ANAPC11 FANCL_C Prok-RING_1 zf-RING_4 zf-C3HC4_3 zf-RING-like Neurokinin_B zf_RING_Vps8_fungal zf-RING_16 SLX1_C zf-C3HC4_4 DpnI zf-Nse Zf_2nd_IFT121 RINGv
Other DBs
NCBI-GeneID: 107906180
NCBI-ProteinID: XP_016688578
UniProt: A0A1U8JIT1
LinkDB
Position
D02:complement(297052..298091)
AA seq 171 aa
MSTLAPSNENQTYDPFLTPMENFYSHAIMKLAVLLLAMILVVQLNSLIHGRCRENPERAA
ATQLVTVGLKKRDLKRIPVAVYRTGGTSFTATDCPICLGEFLDGEKVRVLPKCNHGFHVK
CIDKWLMSNSSCPNCRHSLLEHETVNRDAIAGPDRLPTDSGDVVIVVQEGS
NT seq 516 nt   +upstreamnt  +downstreamnt
atgagtacattggcaccatccaacgagaatcaaacctatgatcctttccttaccccgatg
gagaatttctactcccatgcgattatgaaattggccgtacttcttttggcaatgatatta
gtggttcagttgaattcgctcatccatggtcgctgtagggagaatccggaacgagcggcg
gcgactcagttggtgacggtggggttgaagaaacgggacttgaaacgaatcccggtggcc
gtttacaggactggcggcacaagctttacggccaccgactgtcccatttgtcttggagag
ttcttagatggggaaaaggtacgagtgttaccaaaatgcaaccatggattccatgtgaag
tgtatagacaaatggttaatgtcgaactcatcgtgcccgaattgtcgacattcattgctc
gaacatgagacggtgaaccgggatgctatcgccggtcccgaccggctaccgacggatagt
ggcgatgttgttatagttgttcaagagggaagctag

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