Gossypium hirsutum (upland cotton): 107906182
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Entry
107906182 CDS
T04793
Name
(RefSeq) uncharacterized protein LOC107906182 isoform X1
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107906182
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ghi03036
]
107906182
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
107906182
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
107906182
NCBI-ProteinID:
XP_016688575
UniProt:
A0A1U8JE32
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Position
D05:complement(8275893..8281204)
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AA seq
1374 aa
AA seq
DB search
MMAIEKNNFKVSRFDSEFSYGSRETTVSSDEDELQRQSSAVDCDGDDDDDDEFDDADSGA
GSDDFDLLELGETGAEFCQVGNLTCSVPLELYDLPGLEDILSLDVWNECLSDEERFSLTK
FLPDMDQDTFMRTLNDLLKGDNFHFGSPIKKLFNMLKGGLCEPRVALYREGLNFFQKRQH
YHHLRKHQNNMVANLCQIRDAWLKCRGYGIEERLRVLNIMRSQKSLVYEKLEDEDSESSK
REDLDDGLWSKKVKDRKASQKKAHYSGYGVEPNLEFISRGQLMALEPSKYGKQNPKGMLK
TGGSNFPFTKDYGTCFYPSLNMNSEPYGFPGTLPRQKYESGAVLRSRDWMRLDDDAKDPM
FGAGIQRDRNVVRDSIMGKSGSLRAGKKYERLEEFAGDSSAALPLSSKHDLQAHGRNRNM
NKLSEAKMYTSKPPNRRSDDLPKKVKYSENHLQFAVGKQIKSSKGRTPPFPLKGSRVDLS
ECAEMFCQNKNHGEDISVDSSVRSDDWNVRSKKWKTGRDSPDVSFKSYKVSSPLMNDRFL
QSDSRIKPSQEKIRGNYVQKRGPVSKGNRAFIRKEKTESDSSEQFDNDEDSNPLMRSKLA
YPTGIIKDSQLSSLKSGVDSKRTKSFKKNSMEDGWTVDGITRFSKKSFREDVHVPGLENY
YFEGKQKGKMSKSPLLNSTSSVMDEVDRKQVYKLGKSAQLRGEPGNRLHKSSSRVYPTDK
RQKGELAYDHSTSQSNYLRDYLVDEEDALPVTLLLADENNPGRNRKKGQSIEAYDRCEKS
EASLLGCNKGTKKRKGKEYVAHVDRRGKDGNLQSNLEQQIDDSLFLKKKGKRKLEADIGT
SDMEASEPHGAELGTIDVEIETKPQKKPFTLITPTVHTGFSFSIIHLLSAVRLAMITPLP
ENSLEVSKPREEQNGKQEGGANGVLSCENAVSNDLDHPVQASALSLTVHEIVSRVAANPG
DPCILETQEPLQDLVRGVLKIFSSKTAPLGAKGWKALVAYEKSTKGWSWVGPVMHSSNDH
ETIEELTSPEAWGLPPKMLVKLVDSFANWLKNGQETLQLLGSLPAPPLELMQANLDEKER
FRDLRAQKSLSTISPSSEEVKAYFRREELLRYSIPDRAFSYTAADGKKSIVAPLRRCGGK
PTSKARDHFMLKRDRPPHVTILCIVRDAAARLPGSIGTRADVCTLIRDSQYIVEEVSDAQ
VNQVVSGALDRLHYERDPCVQFDGERKLWVYLHREREEEDFEDDGTSSTKKWKRQKKDTA
EQPDQGAVTVAFHGTGDQSGFDLVSDLNVESPCCDKKMETDSHNRQNVEDNADTSHGSEQ
GNTQQHGHPMQESKLLCQENSTNEDFDQHFRSESTERVEGGAVADPIQGFCVIR
NT seq
4125 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgattgagaagaataacttcaaagtttcacggtttgattcggagttctcgtat
ggtagtagagagacgactgtgtcgagtgatgaggatgagcttcaacgtcaaagctcagct
gttgattgtgatggcgatgatgatgatgatgatgaatttgatgatgctgattcaggagca
ggttcggatgactttgatttattggaattaggagaaacgggggctgaattctgccaagtt
gggaacttgacttgttctgttcctttggagttgtacgatcttcctggattggaagatatt
ttgtctcttgatgtgtggaatgagtgtttaagtgatgaggagcggtttagccttactaaa
tttttgcccgatatggatcaggatacatttatgcggactttgaatgaccttcttaagggt
gataattttcattttgggagtcctataaagaagttgtttaatatgttgaaaggaggctta
tgtgagccaagggtcgcactttatcgggagggtttgaatttctttcagaagcgacagcat
taccatcatttgaggaagcatcagaataatatggttgccaatctttgtcaaataagggat
gcttggcttaagtgtaggggatacggtatcgaggagcggcttcgtgttttgaacattatg
agaagtcagaagagtttggtgtatgaaaaattagaagatgaggattctgaatcctccaaa
agagaggatttggatgatggattgtggagcaaaaaggtgaaggacaggaaagcttcacag
aaaaaggcacactactcgggctatggggttgaaccgaatttagaattcatttcccgagga
cagctgatggctttggaaccatcaaaatatgggaagcagaatccaaaaggtatgcttaag
acaggtgggtcaaattttccttttacaaaagattatgggacctgcttttaccctagtttg
aatatgaactctgagccatatggttttccaggaactcttcctcgacagaaatatgagtca
ggggctgtactcaggtctagggattggatgaggttagatgatgatgccaaagacccaatg
tttggagcaggtattcaaagagaccgaaatgttgtgcgtgatagcatcatgggaaaatct
ggttcattgagagcagggaaaaagtatgaaagactggaagaatttgctggtgatagttct
gcggctttgcctttgtcttcaaagcatgacttgcaggcccatggtaggaacaggaatatg
aataaattgtctgaggcaaaaatgtatacttcaaagccacctaacaggagatctgatgat
ttgcccaagaaggtcaagtattctgaaaaccatctgcaatttgctgttggaaaacaaatt
aagtcttcgaagggccgaactcctccatttccattgaaagggagtcgagttgacttatct
gaatgtgctgaaatgttttgtcaaaataagaaccatggagaagatatctctgtggattct
tcagttagatctgatgattggaatgttaggagcaagaaatggaaaacaggacgagattct
ccagatgtcagttttaaatcttataaagtttcttcaccactgatgaatgatcgattcttg
cagtctgacagtagaataaaaccttcgcaggagaagatcagagggaactatgtgcaaaag
agaggccctgtttccaaaggcaatagagcatttattagaaaagaaaaaacagaatccgac
tcatctgagcaatttgataatgacgaggatagcaatcctctaatgagaagcaaattggca
taccctactggtatcataaaagattctcagttgtcttcattgaagtctggtgtagattct
aaaaggaccaaatcttttaagaaaaattctatggaggatggatggactgttgatggaatc
actcgcttctccaagaagagctttagggaagatgtgcatgtgccaggactagaaaactac
tattttgaaggaaaacagaagggcaagatgagtaaaagccccttgcttaactctacttct
agtgtaatggacgaggttgataggaaacaagtttacaagttgggtaaaagtgcccagtta
cgaggggaacctggtaacaggttacacaagtcctcatcgagggtctaccctactgacaaa
aggcagaaaggtgaacttgcctatgatcattctacgtctcagtcaaattatctgcgtgat
tatcttgttgatgaggaggatgctttacctgtgacactcttgttagctgatgaaaataac
ccgggtagaaataggaagaaaggccagagcattgaagcatatgatcgctgtgaaaaatct
gaagcttcattactagggtgcaacaaagggacaaagaagaggaaggggaaggagtatgtg
gcacatgttgatagaaggggcaaagatggtaacctgcagtctaaccttgagcagcaaatc
gatgattcccttttcttgaagaaaaagggaaaacgaaaactggaggctgatattggtact
tctgatatggaagcttctgaaccacatggtgcagaattaggaaccatagacgtggagata
gaaaccaaaccacagaaaaagccatttactttgatcacccccacagttcatactggtttc
tcgttctcaattatacatcttctttctgcagttcgcttggcaatgattacaccacttcca
gaaaattccttagaggttagcaagcctagagaagagcaaaatggaaagcaggaaggtggt
gcgaatggggttctttcttgtgaaaatgcagttagcaatgatttggaccatcctgtgcaa
gcaagtgctctttctctaactgttcatgagattgttagtcgggtggcggcgaaccctggg
gatccatgtatccttgagacacaagagccgcttcaagatttagttcggggagttctgaaa
attttctcatcaaaaacagcacctttgggagcgaaaggctggaaggcacttgttgcctat
gagaagtccacaaaaggttggtcttgggttggtcctgttatgcatagctcaaatgatcat
gagactattgaggagttaacatcacccgaagcctggggtctgcccccgaaaatgcttgtc
aagttagttgattcatttgcaaattggctaaaaaatggtcaggagactctccagctatta
gggagtcttcctgcaccaccgcttgaattgatgcaagccaatttagatgagaaagaaagg
ttcagagacctaagagctcagaagagccttagcaccattagtccaagttctgaagaagtg
aaagcttatttccgtagggaggagcttcttaggtattctattcctgacagggccttctct
tacacggctgctgatggcaaaaaatctatagttgctcccttgcgaaggtgtggaggtaaa
ccaacttcaaaggctcgagatcattttatgctgaaacgtgaccggccaccacatgttaca
attctttgtattgtgagagatgcagctgccagattgcctggaagtatcggcacccgggca
gatgtttgtactttgataagagactctcagtacattgttgaagaagtttctgatgcacaa
gttaaccaggttgttagtggggccttagaccgtttgcattatgaacgtgatccttgtgta
cagtttgatggagagaggaaattgtgggtttatttgcatagagaaagagaagaagaggat
tttgaggatgatggtacttcatctactaagaaatggaagaggcagaaaaaagatactgct
gagcaacctgatcaaggagccgtaactgtggcttttcatgggactggggatcaatcagga
tttgatttggtctctgatcttaatgtcgagtctccatgctgtgataaaaagatggagaca
gattcccataatagacaaaacgtggaggataatgctgacaccagtcatgggtctgagcaa
ggtaacacccaacaacatggtcatcctatgcaagaaagcaaattgctatgtcaagaaaat
tccactaatgaagattttgatcaacatttcaggtcagagtccaccgagagggtagaaggt
ggtgcggttgccgatcccattcaaggtttttgtgtcatacgttga
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