Gossypium hirsutum (upland cotton): 107906244
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Entry
107906244 CDS
T04793
Name
(RefSeq) putative cyclic nucleotide-gated ion channel 15
KO
K05391
cyclic nucleotide gated channel, plant
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
107906244
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ghi04040
]
107906244
Ion channels [BR:
ghi04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
107906244
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
IQ
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
107906244
NCBI-ProteinID:
XP_016688678
UniProt:
A0A1U8JEC2
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Position
D05:complement(8791068..8795442)
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AA seq
714 aa
AA seq
DB search
MGYGNSRSVRFQDDLELAKLHNTINGDGMNMIKLKFNIDGTQISEPGTKKGDKELPTSRS
SSCRTGKSLKAKVLSRVFSEDFERVKKKILDPRGPVIHRWNKIFLVSCLVSLFVDPLFFY
LPVVWKEVCIDIGVPHEVILTIVRSLADAFYLIQIFIRFRTAYVAPPSRVFGRGELVIDS
RKIASRYLQKSFWIDLIAALPLPQVLIWIVIPNLRGSTMTNTKNVLRFIIIFQYLPRLFL
IFPLSSQIVKATGVVTETAWAGAAYNLILYMLASHVLGACWYLLAIERQEACWRTACDVE
DPWCQYKFFDCHRVKDPGRDTWFKSSNITNLCSPSSSFYQFGIYGDALTFDVTTSPFSNK
YFYCLWWGLRNLSSLGQNLDTSTYEGEIIFAIIIATLGLVLFALLIGNMQTYLQSTTVRL
EEWRIRRTDTEQWMRHRQLPPELKQSVRKYDQYKWLATRGVDEEALLKGLPLDLRRDIKR
HLCLDLVRRVPLFDQMDERMLDAICERLKPALCTEGTILVREGDPVNEMLFIIRGHLDSY
TTNGGRTGFFNSCKIGPGDFCGEELLTWALDPRPSVILPCSTRTVKAISEVEAFALRAED
LKFVASQFRRLHSKQLRHKFRFYSHQWRTWAACFIQAAWRRFKKRKEAAELRAKENLVMA
AEPEPPAPGSGLAMYAARLAASTRIGVKMHSGSGSGVVSSLPKPAEPDFSVDEE
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atggggtatggtaattcgagatctgtaagatttcaagatgatcttgaattggcaaagctc
cacaacaccattaatggagatggtatgaatatgataaagctgaaattcaacattgatgga
acccaaatatcagagcccgggaccaagaagggtgacaaggagttgcctactagtagaagt
agtagctgtaggacaggcaaatccttaaaagctaaagtactgtccagggtattctcagag
gactttgagagagtgaagaagaagattttggatcctcggggaccggttattcaccggtgg
aacaagattttcctagtatcatgcttagtgtctttgtttgtggatcctttgttcttttat
ttgccagtagtttggaaagaagtctgcattgatattggagtaccacatgaagttatcctc
accattgttagatcattggctgatgccttttatttgattcagattttcattcggtttcgg
acagcttatgttgcgcctccttctcgtgtatttgggagaggagagcttgtaatagattcc
aggaagattgcttccaggtacctccagaaaagtttctggattgatttaattgctgccctg
ccacttcctcaggttttgatctggattgtcattccaaatcttagaggttcaacgatgaca
aacacgaaaaacgtactccgcttcataataattttccagtaccttcccagactttttcta
atttttccactctcatcacaaattgtcaaggccactggtgttgttacagaaacagcatgg
gccggcgctgcttataacctcattctctacatgctggctagccatgttttaggagcttgc
tggtatcttctcgcaatagagcgacaagaagcatgctggaggactgcctgtgatgtcgag
gatccatggtgtcagtataaattttttgattgccacagggttaaagaccctggcagggat
acctggttcaagtccagcaatattactaacctatgcagtccaagttccagcttctatcag
tttggtatatatggtgatgccttgacatttgatgttacaacttcaccattctccaacaag
tacttttattgcctctggtggggtttgaggaacttgagttctctgggacaaaatcttgac
acaagcacttatgagggtgaaataatttttgccatcattattgcaacccttggtctggtt
ctctttgcgctgctcattgggaatatgcaaacatacctccaatcgacaactgttaggttg
gaagaatggagaattaggagaactgatacagagcaatggatgcgtcacaggcaacttcct
cctgagctaaagcaatctgtcagaaaatatgatcagtataaatggctagctacaagagga
gttgatgaagaagctttactcaaaggccttcccttggatctacgtagagacatcaaacgc
cacctctgtctcgaccttgttcggcgagtcccactgtttgatcaaatggatgaaaggatg
ttagatgcaatctgtgagagacttaaaccagccttgtgcactgaaggcactatcttagtc
cgcgaaggtgatcctgtcaatgagatgctcttcataattcgaggccacctagattcctat
accacgaatggtggccgtaccggattcttcaattcatgcaagattggcccgggagacttc
tgcggtgaggaactgcttacatgggcattggatcctcgtccgagtgtcattctcccatgc
tcaactcgcacagttaaagcaatatcagaagtagaggcctttgctcttagagccgaagac
ctcaaatttgtggcatcacagttcagaagattacatagcaaacaactaagacacaaattc
cggttttactcacaccagtggaggacatgggccgcctgtttcatacaagcagcatggcgt
cggtttaagaaacgaaaggaagcggctgaacttagagctaaggagaacttggtgatggct
gcagaacctgaaccaccggcacctggttcaggcttggctatgtatgcagccaggctagca
gcaagcactaggataggtgttaagatgcattcaggatctggttctggggttgtcagctcc
ttgcccaaaccagcagagcctgatttttctgtagacgaggaatga
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