Gossypium hirsutum (upland cotton): 107906372
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Entry
107906372 CDS
T04793
Name
(RefSeq) ABC transporter G family member 39 isoform X1
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
107906372
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ghi02000
]
107906372
Transporters [BR:
ghi02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
107906372
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
ABC_trans_N
AAA_21
SMC_N
AAA_16
AAA_23
AAA_29
AAA_22
Rad17
AAA_30
TsaE
AAA
AAA_18
RsgA_GTPase
AAA_33
NACHT
AAA_25
T2SSE
ABC2_membrane_3
AAA_17
AAA_11
ABC_ATPase
AAA_28
ATP_bind_1
DO-GTPase1
nSTAND3
AAA_5
RuvB_N
AAA_19
Motif
Other DBs
NCBI-GeneID:
107906372
NCBI-ProteinID:
XP_016688840
UniProt:
A0A1U8JEX7
LinkDB
All DBs
Position
D05:complement(9886898..9894969)
Genome browser
AA seq
1452 aa
AA seq
DB search
MASALAGDDLSARSMSSGREGWGSARFRDIWQTPPEVFERSQRHDTEEDLIWAAIERLPM
YDRLRKSMIRKVGDNGKVVLHEVDVTKLGQQNKKQLIDSILKVVEQDNENFLRKLRDRTD
RVGIEIPKIEVRFEHLSVDGDVYVGSRALPTLLNVTLNIIESILGLVRLVPSRKRKIQIL
KDVSGIVKPSRMTLVLGPPGAGKTTFLQALAGRLDQDLRSSGRITYCGYEMSEFIPQRTC
AYIGHHDVHHGEMTVRETLDFSGRCLGVGTRYEILKELSKREKEAGIKPDPEIDAFMKAT
AMAGQRTSLVTDYVLKILGLEMCSDTLVGDDMRRGISGGEKKRLTTGEMLVGPAKAFFMD
EISTGLDSSTTYQICKFMRQMVHIMDVTMVISLLQPAPETYDQFDHLILLSEGQIVYQGP
TQGVLEFFEYMGFKCPERKGVADFLQEVTSKKDQQQYWFRKDQPYSYVTVSEFVQGFNSF
HIGQQLESDLRVPYDRSVARHPAVVTEKYGISNWELFRACFAREWLLMKRNSFVYIFKTV
QITIMSLIAMTVFFIKEMHAGDLEDGSKFFGALFYSLINVMFNGMAELAMTIFRLPVFYK
QRDFLFYPPWAFSLSIWIIKIPLSLLESGIWICLTYYTIGFAPAASRFFRQFLAFFGIHQ
MALSLFRFIAAVGRTQVIANTLGTFTLLMVFVLGGFIVARDDIEPWMIWGYYLSPMMYGQ
NAIVMNEFLDKRWNRQNNDTRINATTVGQVLLKSRGFHTEDCWFWISVAALFGFSVLFNI
LFIVALTYLNPLRDSKAIVVDENENTKKKESSSGKNIPGTDLPVRNSLDATNITGRPTGR
GMVLPFKPLSLAFNHVSYSVDMPSEMKSQGVEEDHLKLLRNVSGAFRPGILTALVGVTGA
GKTTLMDVLAGRKTGGYIEGSISVSGYPKNQATFTRVSGYCEQNDIHSPHVTVYESLLYS
AWLRLSSEVDTKTRKMFIEEVMELIELKPLRGAIVGLPGVDGLSTEQRKRLTIAVELVAN
PSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELLLMKRGG
QIIYAGPLGRNSHNLVQYFEAIPGVPKIKEGYNPATWMLEITAPAVENQLNADFAEIYAE
SSLYQRNQEIIEELSRPVPGSEDLHFPTKYSLPFLSQCKVCFLKQHWSYKRNPRYNAIRF
FITIVVGILFGLIFWNKGQQIAKQQDVLNFFGAMYSAVFFLGAVNASTVQGVVAVERTVF
YRERAAGMYSEFPYALAQVAIEIIYTAIQTAIYVALLYLMIGYEWKASNFLWFYYYITAS
YVYFTLYGMMVIALTPGAQVAAIVMSFFLSLWNIFSGFLIPRPLIPVWWRWYYWATPVAW
TLYGLITSQLGDRNSDLEVPGFPDIPVKRYIKEMFGFEYEFLPVVAVVHIGWCLLFFFVF
AYGIKFLNFQRR
NT seq
4359 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcagctttagcaggagatgatttatcggcaagatcaatgagcagcgggcgtgag
ggttgggggtcggcgaggttccgggatatttggcaaactccgcccgaagtgttcgagagg
agccaacggcatgacacggaggaggatctcatttgggctgccatcgaacgacttcccatg
tatgatcgccttcggaaaagtatgataaggaaagttggtgataatgggaaagttgttctt
cacgaagttgatgtaactaagcttggacaacagaataagaagcaactcatagacagtatt
ttgaaggttgtcgaacaagataatgaaaattttctcaggaaattaagggatcgaactgat
agagttggcattgaaattccaaaaattgaagttagatttgagcatttatcagttgacgga
gacgtttacgtcggaagccgagctcttcctacactgcttaatgttaccttgaatatcata
gagagtattcttggattggttcggcttgtaccttctaggaaaagaaagattcagatactt
aaagatgtcagtggaattgtgaaaccgtcaaggatgaccctagttttgggtcctccaggt
gcagggaaaacaacattcttgcaagcacttgcaggaaggcttgatcaggatctaagatct
agtgggagaatcacatattgtggttatgaaatgagtgagtttattcctcaaagaacatgt
gcttatatcggtcaccatgatgttcaccatggtgaaatgacagtgagggaaacattggat
ttctcgggacggtgtctcggtgttggcactagatatgaaatattgaaagagctctcaaag
cgggaaaaagaggcagggatcaagccagatcctgaaattgatgcattcatgaaagcaaca
gctatggcaggccaacgaactagcttggttacagattatgttcttaagatacttggacta
gaaatgtgttcggatactctggtcggggacgacatgcgtagaggtatttctggtggtgaa
aagaagcgtttgaccactggagagatgttggttggtccagcaaaggccttcttcatggac
gaaatatcgacggggctggacagttctaccacttaccagatttgcaagttcatgaggcaa
atggttcatatcatggatgtaaccatggtcatttctcttctgcaaccagcacccgagaca
tacgatcagtttgaccaccttatcctactttcggaaggtcaaattgtctaccaaggtccc
acccaaggtgtccttgagttctttgaatacatgggtttcaaatgccctgaaagaaaagga
gttgcagactttttgcaagaagtaacttccaagaaggaccaacagcaatattggttcaga
aaagaccagccttatagttatgttacggtttccgagtttgtgcaggggttcaactcattc
cacattggccaacagcttgaatccgatctgagggttccttatgacagatcagtagcacgc
catcctgcagtagttacagaaaaatatggcatttcaaactgggagttgttcagggcatgc
tttgcaagggaatggttgctaatgaaacgtaactcattcgtgtacatattcaagactgtc
caaattacgatcatgtcattgattgccatgaccgtatttttcataaaagaaatgcatgca
ggcgatttggaagacggttcgaaatttttcggagctttgttttacagtctaatcaatgta
atgtttaatgggatggcagaacttgcaatgacaattttcaggcttcctgttttctataaa
caaagggacttcttgttctatcctccatgggcttttagcctttccatttggatcatcaag
atcccattgtcattattggaatctggaatatggatctgcctcacatactacaccattgga
tttgctccagctgctagcaggttcttcagacagttcctggcattctttggcatacatcaa
atggctttatccctctttaggttcattgctgctgtaggaagaacacaagtcattgcaaac
acattgggtaccttcaccttgctaatggttttcgtgcttggaggtttcattgttgcaaga
gatgacattgaaccatggatgatatggggctactatttgtctccaatgatgtatggacaa
aatgccatcgtcatgaatgaatttcttgataaaagatggaatagacaaaataatgacacc
agaattaatgcaactacagtcggacaagtccttctaaagagtagaggtttccatacagaa
gattgttggttttggatttctgttgcagcgctgttcggattttctgttctcttcaacatt
ttattcattgtggcgttgacttacctcaaccctctgcgtgattccaaagcaatagttgtt
gatgaaaatgaaaatacgaagaagaaagagtcatcctcgggaaaaaacataccaggtact
gatctgccagtgagaaattctttggatgccaccaacatcacggggcgacccactggaaga
ggaatggtgttgcctttcaaaccactttcacttgcgttcaaccatgttagctactctgta
gatatgccttctgaaatgaagagccaaggtgttgaagaggatcatcttaagttgctacga
aatgttagtggcgcttttagaccagggatattgacagcattggtgggtgtcactggtgcc
ggaaagacaaccctgatggatgtattagcaggaaggaaaaccgggggatacattgaggga
agcataagcgtctctggatatccaaagaaccaagctacatttactcgtgtcagcggctac
tgcgaacaaaatgatatccactctcctcatgtcacagtctatgaatccctgctgtactca
gcctggcttcgtctttcttcagaagttgacaccaagacaagaaagatgttcattgaagag
gttatggagttgattgagctcaagccactacggggtgctatagttggccttccaggagta
gatggtctttcaacagaacaaaggaagaggttgacaattgcagttgaattggttgctaat
ccttctatcatctttatggatgagccaacatccgggcttgatgccagggctgctgcaatt
gtaatgcggacagtgagaaacaccgttgatacggggagaaccgtagtgtgcaccattcac
caacctagcatagacatttttgagtcttttgatgagttgctgttgatgaaaagaggaggg
caaatcatctatgccggacctcttggtcgcaactctcacaatcttgtacaatattttgag
gctataccaggagttccaaaaatcaaggaaggatataatccagcaacatggatgcttgaa
atcaccgctcctgcagttgagaatcagctgaatgcagactttgcagaaatttacgctgaa
tcctccctttatcagaggaatcaagaaattattgaagagctcagtcgtccggttccgggc
tccgaggatctccactttccgaccaaatattctctaccattcctctctcaatgcaaggtt
tgtttcctgaagcaacactggtcttacaagaggaaccctcggtacaatgctattaggttc
ttcataacaattgtcgtcggaatcttgttcggccttatcttttggaacaaaggacaacaa
atagcaaaacaacaagatgtgctgaactttttcggagcgatgtacagtgcagtgtttttc
cttggagcagtgaatgcatcaacggtgcaaggcgtagttgcagtagagagaaccgttttt
tatcgcgaaagagctgccggaatgtattctgaatttccttacgcgcttgctcaggtggca
atagagataatctataccgcaatccagacagcgatctacgttgcactcctatacttaatg
attgggtatgaatggaaggccagcaacttcctatggttctactactacataacagcaagt
tatgtctacttcacactgtatgggatgatggttattgctctcactccaggggcacaagtt
gctgcaattgtcatgtcattcttcctaagtttatggaacatcttctcgggttttctcatc
ccgagaccgctaatcccggtatggtggaggtggtattattgggcaactccagtggcttgg
acactctatggccttattacgtctcaattgggtgaccgaaactccgatcttgaggtgcct
ggatttcccgacattccggttaagagatacattaaggaaatgttcgggttcgagtatgag
ttccttcctgtagttgctgtcgtacacatcggttggtgtctgctgtttttcttcgtattt
gcctacggtatcaagttccttaactttcaaagaagataa
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integrated database retrieval system
