Gossypium hirsutum (upland cotton): 107906375
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Entry
107906375 CDS
T04793
Name
(RefSeq) YTH domain-containing protein ECT4 isoform X1
KO
K20102
YTH domain-containing family protein
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107906375
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107906375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
Motif
Other DBs
NCBI-GeneID:
107906375
NCBI-ProteinID:
XP_016688844
UniProt:
A0A1U8JKL1
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Position
D05:complement(9931509..9937797)
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AA seq
653 aa
AA seq
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MAATPDRNPEEQQADPENVKEQVVPLPTKSMTLVSPNSSQDAAPVAHPRDGAGQSGSFAS
AGDRNVYSPTIYAPQPQAFYYRGYDNSAGEWDEYPPYVNAEGLELGSLGVFNDNPSLVFH
PGYGYNPQMPYGPYSPVSTPLPSVGGDAQLYSPHQFPFSGPPYYQQLVPPSMPYISSPSS
VSQPELTTLVNVDQQGDNMLFGPRPSYPTPLGSFGRGSLPGNPGTLGFNDLPQGFDGFRS
GGLWSDWSRPSDRQRSLTPISPAVSPQPIGPIGQNVPTVPQQQRSFYPLGSGMNSYSRGY
LQSGLNQGAGFGNASVPSLGANSRGWLSFDGKRRCGRDSDISLCGCNGALDILSEQNRGP
RASKPKNQITADNNSSIDDNKNNKSSAKIHDDSYNTPDFPTDYKDAKFFIIKSYSEDNVH
KSIKYGVWASTPNGNKRLDAAYREAVENQDNCPVFLFFSVNASAQFCGVAEMVGPVDFDK
SVDYWQQDKWSGQFPVKWHIIKDVPNSQLRHIILENNDNKPATNSRDTQEVKLEQGLEML
SIFKSYETDMSILDDFEFYEDRQKAMQERKARQQASLMSVGVVGESEHRNTVTLSNDFIK
QMSKSFAQVVCLDDGNKEGTAIEKTSSASDGSKGARVKLEDVITAAASSAQAS
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaaccccagatcgtaaccctgaagagcaacaagctgatccagaaaacgtgaag
gagcaggtagttcctcttccaacaaaaagtatgacgttggtttctcctaattcctctcaa
gatgctgccccagtagctcatcccagggatggcgctggtcaatctggatcatttgcgtca
gctggagaccgtaacgtctactcacctacaatctatgcacctcagcctcaggctttctat
tacagaggttatgacaactctgctggtgaatgggatgaatatccaccgtatgtcaatgct
gagggactagaacttggatctctgggtgtcttcaatgataatccatcacttgtcttccac
cctggatatggctacaatcctcaaatgccgtatgggccatattccccggtctcaactcct
ttgccttctgtaggtggtgatgcacagttgtactccccacatcaatttccattctctgga
ccaccatattatcagcagcttgttcctccgagtatgccttatatttcttcaccatcttca
gtttcacaaccagagctaaccacattagttaatgttgaccaacaaggtgataacatgctt
tttggaccaaggcctagttatcccactccattgggatcttttggtagaggcagtttacct
ggaaatcccggtaccctaggatttaatgatttaccgcaaggttttgatggattcaggtct
ggaggactttggtctgattggtcgaggccttctgacagacagagatctttgactcctata
tcgcctgcagtatctccccagcctattgggccaattgggcagaatgttccaacggtacct
cagcagcaaaggtcattttatccgttaggatcaggaatgaactcctatagcagaggctat
ctgcaaagtggtctgaatcaaggtgctggttttggaaatgcatcagttcctagtttagga
gcaaatagcaggggctggctatcttttgatggtaaaagacgatgtggaagagacagtgac
atctctctatgtggttgtaatggtgctcttgatatccttagcgagcaaaaccgagggcca
agggcctcaaaacctaagaatcaaatcacagctgataataattcttctatcgatgataat
aaaaacaacaaatcttcagccaagatccacgatgattcttacaacacaccagatttccct
actgattacaaggatgctaagttcttcataatcaagtcttacagtgaagataatgttcac
aagagtatcaaatacggtgtttgggctagtacacctaatgggaacaaaaggttagatgct
gcctaccgtgaggccgtggagaatcaagacaattgcccagtgtttctcttcttttcggtg
aatgctagtgctcagttctgtggggttgcagaaatggttggacctgttgattttgacaag
agtgtggattactggcagcaagataaatggagtgggcaattccctgtcaaatggcatatt
atcaaagatgttccaaacagtcagctgcgtcacatcatactggaaaataatgataataag
cctgcgactaacagtagagatactcaggaggtgaaactggagcaaggacttgagatgttg
agcatctttaaaagttatgaaactgatatgtcaatcctggatgattttgaattttatgag
gacagacagaaggccatgcaagagcgtaaggctagacaacaagctagcctcatgtctgta
ggggttgttggagaaagtgagcatagaaacactgttacgttatccaacgatttcataaag
cagatgtctaagagctttgctcaagttgtgtgcttggatgatggtaataaggaaggcact
gctattgagaaaactagttctgcctctgatgggtcaaaaggtgcaagggttaaacttgaa
gatgttatcacagcagcagcctcttctgctcaggcaagttaa
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