Gossypium hirsutum (upland cotton): 107906657
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Entry
107906657 CDS
T04793
Name
(RefSeq) ubiquitin C-terminal hydrolase 13 isoform X1
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
107906657
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ghi01002
]
107906657
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107906657
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
107906657
Peptidases and inhibitors [BR:
ghi01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
107906657
Ubiquitin system [BR:
ghi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
107906657
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH_2
MATH
UCH_1
Nitroreductase
Malt_amylase_C
Motif
Other DBs
NCBI-GeneID:
107906657
NCBI-ProteinID:
XP_016689207
UniProt:
A0A1U8JFW0
LinkDB
All DBs
Position
D05:6504382..6523811
Genome browser
AA seq
1116 aa
AA seq
DB search
MTVMTPSPIDQQEDEEMLVPHSDLTDNHQPMGVVSQAENTNTVENQPVEDPPPSRFTWKI
DNFSRLNTKKHYSDVFVVGGYKWRILIFPKGNNVDHLSMYLDVADSASLPYGWSRYAQFS
LAVVNQIHSKYSIRKDTQHQFNARESDWGFTSFMPLGELYDPCRGYLVNDTFVVEAEVVV
RKIVDYWAYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPSGS
IPLALQSLFYKLQYSDSSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTV
VEGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLEG
DNKYQAEQYGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDR
DDGKYLSPEADRSVRNLYTLHSVLVHSGGVHGGHYYAYIRPTLSDQWYKFDDERVTKEDM
KKALEEQYGGEELPQTNPGFNNTPFKFTKYSNAYMLVYIRESDKDKIICNVDEKDIAEHL
RERLKKEQEEKEHKKKEKAEAHLYTIIKVARDDDLAEQIGKGICFDLVDHDKVRSFHIQK
QMPFNVFKEEVAREFGIPVQFQRFWLWAKRQNHTYRPNRPLTPLEETQSVGALKEVSNKV
HNAELKLFLEVELGLDLRPIAPPYKTKEDILLFFKHYDPEKEELRYVGRLFVKSAGKPIE
ILSRLNKMAGYAPDEDINLYEEIKFEPSVMCEPIDKKITFRASQLEDGDIVCFQKPLPVE
STNQYRYPDVPSFLEYVHNRQVVHFRSLEKPKEDDFCLEMSRLYTYDDVVERVAQQLGLD
NPSKIRLTSNNCYSQQPKPQPIKYRGVDHLSDMLFHYNQTSDILYFEVLDIPLPELQGLK
TLKVAFHHAAKDEVVIHTIRLPKQSTVGDVINDLKTKVELSHPDAELRLLEVFYNKIYKI
FPPNEKIENINDQYWTLRAEEIPEEEKNLGPNDRLIHVYHFTKETAQNQMQILNFGEPFF
LVIHEGETLAEIKVRIQRKLQVPDEEFAKWKFAFLSLGRPEYLQDSDIVSSRFQRRDVYG
AWEQYLGLEHSDNIPKRAYAINQNRHTFEKPVKIYN
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgactgtcatgactccttcacccatcgatcaacaggaagacgaggaaatgctcgtgcca
cactctgatttgaccgacaatcatcagcccatgggagttgtatcacaagctgagaacaca
aataccgtggaaaatcaaccggtggaggatcctcctccgtcaagattcacttggaagatt
gataatttctctagattaaacaccaagaagcattattcagatgtttttgtagttggtggt
tataaatggcgaatactgatatttccaaagggtaacaatgtggatcatttgtccatgtat
ctggatgttgctgactcagcaagtttaccctatgggtggagtagatatgcgcagttcagc
ttggcagtagttaatcaaattcatagtaaatattcaatcagaaaagacacacaacaccag
tttaatgcaagagaaagtgattggggttttacatcctttatgccccttggtgagctatat
gatccttgcagagggtatcttgtgaatgacacttttgttgttgaagcagaggtcgttgtc
cgcaaaattgtggattactgggcatatgactcaaagaaggaaactggttatgttggactt
aagaatcaaggagcaacatgttacatgaactctctgctccaaaccctgtatcatattcct
tacttcaggaaggcagtttatcatatgcctacaactgaaaacgatatgccatctggaagt
atccctcttgctctgcagagtttattttacaaactccagtacagtgacagtagtgttgca
acaaaagagctgaccaaatcttttggatgggacacatacgattctttcatgcagcatgat
gttcaagaacttaatagagttctatgtgaaaaactcgaagataaaatgaagggaactgtt
gtggagggcaccatacagcagttgtttgaagggcatcatatgaactacattgagtgcatt
aatgtggattataaatctacaaggaaggagtcattttatgacctacagcttgatgttaaa
ggctgtcgagatgtatatgcttcttttgacaagtatgttgaagttgaacggcttgaaggt
gataataagtatcaggctgagcaatatggattgcaggatgctaagaagggtgtgttgttc
attgatttccctccagtccttcaacttcagcttaaacgttttgaatatgattttatgcga
gatactatggtcaagattaatgaccgttatgagttccctttgcaacttgatcttgatcga
gatgatggaaaatacttatcaccagaagctgataggagtgttcggaatctttacacactt
cacagtgtccttgttcatagtggtggagtgcatggtggacattattatgcatatatcagg
ccgactctttctgatcagtggtataaatttgatgatgaaagagtaaccaaagaagatatg
aaaaaggcattagaggagcagtatggtggggaagagttaccgcagacaaacccagggttc
aataatactccttttaaatttaccaaatattcaaatgcatacatgctggtgtatatacgt
gaaagcgacaaagacaagataatatgtaatgtagatgagaaggatatcgcagaacatctt
agggagagattgaagaaagaacaagaagagaaagagcataaaaagaaggagaaggcagag
gcacacctttacactattataaaggttgctcgagatgatgatcttgcagagcagattggg
aaaggtatatgttttgatcttgtggatcatgataaagtcaggagttttcatattcagaag
cagatgcctttcaatgtgtttaaggaagaggttgctagagagtttggcataccagtgcaa
tttcagcgattctggttgtgggccaagcgtcaaaaccatacctaccgtccaaaccgacca
ttgacacctttggaggaaacacaatctgttggagccttgaaggaggtatcaaataaggtt
cacaacgcagaactaaagttgttcctggaagttgagcttggactggatttacgcccaatt
gcgccgccatataagacaaaggaagatattttacttttcttcaagcactatgatcctgag
aaagaagagcttcgctatgttggaaggctgttcgtgaaaagtgcaggcaagccaatagaa
attttgtccagattaaacaaaatggcagggtatgctcctgatgaagatatcaatctttac
gaggaaataaagtttgagcccagtgttatgtgtgaaccaattgacaagaaaatcacgttt
cgtgctagccagcttgaggatggtgacattgtttgctttcaaaagcctctccctgttgaa
agtactaatcaataccgctatccagatgttccttcatttctggaatacgtgcataatcgc
caggttgtacactttcggtctctggaaaaacccaaggaagatgatttctgtctggagatg
tcaaggctttatacttatgatgatgttgttgaaagagtagctcagcaacttggtttggat
aatccatcaaaaatcaggcttacatcaaacaactgttactcccagcagcccaaacctcag
cctattaagtatcgtggagtggatcatttgtctgacatgctgttccactacaatcagaca
tctgatattttatactttgaagtattagacatccctctgccagaactacaaggtttgaaa
acgctgaaggtagcatttcatcatgctgcaaaagatgaagttgttatccatactattagg
cttccaaaacagagcactgttggtgatgtgattaatgatcttaagacaaaagtggagttg
tctcatcctgatgcagaattgagattgcttgaagttttctataacaagatctacaagatt
ttcccacccaatgagaagattgagaatataaatgaccaatactggacactacgagcagaa
gagataccagaggaagagaaaaatcttggtccaaatgatcgcctaattcatgtataccac
tttactaaggaaacagctcagaaccagatgcaaattctgaattttggagaaccctttttc
ttggtgattcatgaaggtgagactttggccgaaataaaagtccgtatacagaggaagctg
caagttcccgatgaggagtttgctaagtggaagtttgcattcctctcacttggtcggcca
gagtaccttcaagattctgatattgtatctagtcgttttcagagaagagatgtttacggt
gcttgggagcagtatcttgggttggagcactctgacaatattcctaaaagagcttatgca
attaatcagaaccgacacacttttgagaagccagtaaaaatctacaattag
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integrated database retrieval system
