KEGG   Gossypium hirsutum (upland cotton): 107906690
Entry
107906690         CDS       T04793                                 
Name
(RefSeq) DNA polymerase epsilon subunit 3
  KO
K02326  DNA polymerase epsilon subunit 3 [EC:2.7.7.7]
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03030  DNA replication
ghi03082  ATP-dependent chromatin remodeling
ghi03410  Base excision repair
ghi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    107906690
   03410 Base excision repair
    107906690
   03420 Nucleotide excision repair
    107906690
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    107906690
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ghi03032]
    107906690
   03036 Chromosome and associated proteins [BR:ghi03036]
    107906690
   03400 DNA repair and recombination proteins [BR:ghi03400]
    107906690
Enzymes [BR:ghi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     107906690
DNA replication proteins [BR:ghi03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    107906690
Chromosome and associated proteins [BR:ghi03036]
 Eukaryotic type
  Chromatin remodeling factors
   CHRAC complex
    107906690
DNA repair and recombination proteins [BR:ghi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      107906690
SSDB
Motif
Pfam: CBFD_NFYB_HMF Histone Bromo_TP
Other DBs
NCBI-GeneID: 107906690
NCBI-ProteinID: XP_016689251
UniProt: A0A1U8JG85
LinkDB
Position
D05:complement(6827359..6828423)
AA seq 215 aa
MPESNGGNQNPLFLSLSIVTGFANCKQFAPKTKFSRGKEREKKEKEMEMEKVVSEAEELP
KAIVRRVVKEKLSECSPDYDFNVHKDAHLAFTESARIFIHYLSATANDICKESKRQTMNA
EDVFKALEEIEFSEFVKPLGASLAEFRKKNAGKKGGAAKENEVKKKRKIEYSSAKNGTKT
KQKKEDNHKEEEQVEGEQEQDEEEDNEEEENHGSE
NT seq 648 nt   +upstreamnt  +downstreamnt
atgcccgaaagcaatggcgggaaccaaaaccctctttttttgtctctgtcaattgtcact
ggctttgcaaattgcaaacaatttgcccccaaaaccaaattttctcggggaaaggaaaga
gaaaaaaaagaaaaagagatggaaatggagaaagtggtatcggaggcggaagagctgccg
aaggcgatcgtgcgacgggtggtgaaggagaagctctctgagtgttcaccggattacgac
tttaacgttcacaaagacgcccacctcgctttcaccgaaagcgctcgcatcttcatccat
tacctttccgctacggcaaatgacatatgcaaggaatcgaagaggcaaacaatgaatgcg
gaggatgtgtttaaagcgcttgaagaaattgaattctcggaatttgttaaacctctgggg
gcttcgcttgctgagttcaggaagaagaatgctgggaaaaagggtggagcagccaaggaa
aatgaggtcaaaaagaagaggaaaatagagtattcatctgccaaaaatggaacaaaaacc
aagcaaaagaaagaggataatcataaagaagaagaacaagtcgaaggagaacaagagcaa
gacgaagaagaagataatgaagaagaggaaaatcatggaagtgagtga

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