Gossypium hirsutum (upland cotton): 107906878
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Entry
107906878 CDS
T04793
Name
(RefSeq) EIN3-binding F-box protein 1-like
KO
K14515
EIN3-binding F-box protein
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04016
MAPK signaling pathway - plant
ghi04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
107906878
04075 Plant hormone signal transduction
107906878
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107906878
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
107906878
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
F-box
F-box-like
LRR_At5g56370
Motif
Other DBs
NCBI-GeneID:
107906878
NCBI-ProteinID:
XP_016689501
UniProt:
A0A1U8JGW5
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Position
D05:4612385..4616481
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AA seq
652 aa
AA seq
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MSKLFSFSGTDDFCPGGSIYTNPKESSLFLSLGRHVDVYFPSRKRSRISAPFVFSGERFE
KKKSSIEVLPDECLFEILRRLPGGQERSSCACVSRRWLTIVSNIRSNEISDNKTTQALDL
NYESTDKKGGDVSEVEDEDVAGGYLSRSLEGKKATDVRLAAIAVGTAGRGGLGKLFIRGS
NSSRGVTAVGLRAISRGCPSLRVLSLWNLATVGDGGLCEIAEGCHQLQKLDLCHCPAITN
ESLLSLAKGCPDLTDLTIEGCANIGNEGIQAIARCCPNLKSVSIKDCPLLGDQGIASLLT
SASYSLSKLKLQALNITDVSLAVIGHYGKAVTDLSLASLPNVTEKGFWVMGNGHGLQKLK
SFTVKACRGVTDLGLEAIGKGCPNLKQFCLGKCAFLSDNGLVSFAKAAGSLESLELEECH
RVTQFGFFGSLINCGAKFKAISLMNCLGIKDLNVGLPPLPPCESLRSLSIRNCPGFGDAS
LAALGKLCPQLQNVELSGLHGITDVGFLPLLESCEAGLVKVNLSGCPNLGDKVVCKMADL
HGRTLEMLNLDGCKISDAGLVAIAENCRLLSDLDVSKCTITDSGIAALACSNLIDLQILS
VSGCNLVSDKSLPSLGKLGQTLLGLNLQQCKAISSGAVDLLVEQLWRCDILF
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagctcttttcttttagtggaactgatgatttttgccctggggggtcgatctac
acaaaccccaaggaatcaagtctctttttgtcccttggacgtcatgtggatgtatatttt
ccctctcgcaagaggtcccgcatcagtgcgccttttgttttctctggagagaggtttgag
aagaagaaatcatcaattgaggttctccctgatgaatgcttattcgaaattttgagacga
ttaccagggggacaagagaggagttcctgcgcttgtgtctccaggcgttggcttacaatt
gtaagcaacatccgcagcaatgaaatcagtgacaacaagaccacccaagcattggatctt
aactatgagagcacagataagaagggtggagatgtttctgaggttgaagatgaggatgtt
gcaggtggatacctctctaggagtttggaagggaagaaagcaacagatgttagacttgct
gctattgctgttggaactgctggtcgtggaggattgggcaagctcttcattcgaggaagc
aattccagtcgtggagtgactgctgttggcctgagggccatttctcgtggatgtccttct
ctaagggttctttccttgtggaatttggctactgttggagatggcggtctttgtgagatt
gctgagggatgtcaccagctacagaagcttgacctttgccactgtcctgctattactaat
gagtctttgctttcccttgcaaagggctgccctgatttgactgatctgaccattgaaggt
tgtgcaaacattggaaatgaaggtatccaagcaatagctcgctgctgtcccaacctaaag
tctgtttcgatcaaagattgccccctccttggagaccaaggaattgcaagccttttgact
tcagcctcatattccctctcaaaattaaagcttcaggccttgaacattactgatgtctct
ctagccgttattggacactatggcaaggcagtgactgacctatctctcgctagccttcca
aatgtgactgagaagggcttctgggttatgggtaatggtcatgggctacagaaattgaag
tctttcactgttaaagcctgccgtggagtgacagatttgggacttgaagctattggcaag
ggttgcccgaatttgaagcagttctgcctcggcaagtgtgccttcttatctgataatggg
ttggtgtcttttgccaaagcagcaggttcactagagagcttggaactggaggagtgccac
agggtcacccaatttgggttttttggttctcttattaactgtggtgcaaagttcaaagct
atctctcttatgaactgcttggggatcaaggacctaaatgtaggattgcctcctctacca
ccttgtgagtcccttcgatcactgtctatccgtaactgccctgggtttggtgatgctagc
ttggctgcgttggggaagttgtgccctcaactgcagaatgtggagttgagtgggcttcat
ggaataacagatgttgggtttctcccattgctcgagagttgtgaggccggtttggtgaag
gttaatctcagcggttgtcccaatttgggtgacaaagttgtttgtaagatggctgatttg
catggtcggactctagagatgctgaatcttgatggatgcaagatcagtgatgctggcttg
gttgcaattgcagagaactgtcggttgctcagtgatcttgatgtctccaagtgcacaata
accgactctggaattgcagctcttgcttgttctaatctgatcgatctgcagatcctatct
gtgtctggttgcaatctggtctccgacaaaagcctgccatcacttggaaaattgggtcag
accctcttggggttaaatctacagcagtgcaaggcaatcagtagtggtgcagttgacctg
ctagtggagcagctatggaggtgtgatatccttttctaa
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