Gossypium hirsutum (upland cotton): 107906901
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Entry
107906901 CDS
T04793
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 23 isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ghi01002
]
107906901
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107906901
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
107906901
Peptidases and inhibitors [BR:
ghi01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
107906901
Ubiquitin system [BR:
ghi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
107906901
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
107906901
NCBI-ProteinID:
XP_016689539
UniProt:
A0A1U8JMK2
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All DBs
Position
D05:4476175..4481695
Genome browser
AA seq
941 aa
AA seq
DB search
MEATVISCSELRIEAETEECSDLGNFSSASGSTSVGLSKRRIVFHPARKPLNGFNDCADE
DFKIETLNPGRDPMRVNGVRSAQVGATGWKVDASDIWENGLDPVLSLRTTFRKIGAGLEN
LGNTCFLNSVLQCLTYTEPLVAYLQSGKHQNSCHIAGFCALCAIQKHVSRALKSTGRILA
PNDLVSNLRCISRNFRNSRQEDAHEYMVNLLESMHKCCLPSGVPSESPRAYEKSLVHKIF
GGRLRSQVKCLQCSYCSNTFDPFLDLSLEIVKADSLLKALKNFTTAELLDGGERQYQCLR
CKQKVRAIKQLTVYNAPHVLTIHLKRFQAHNLGQKIDRKVEFGPTIDMKPFVSGSNEGYL
KYTLYGVLVHRGWSTHSGHYYCFVRTSSGMWYTLDDNRVFQVSEKTVLEQKAYMLFYVRD
RRNTATKNSVDILQRDNVKASVDGKSIFNQNPGEHVQTVPIQNKLSAAVPQKDIINGGLS
KGTIMKEVPSQQNNVQLMEEGLVLKKEAILPSFDVPLLKDPSKASASNLIHGENLQPSAG
SVVGNVASSKIENPTVSTGAKDSYCNESGNCKREFGVPEMVPLNCGGLLKSCTDKIVTKE
TLQKINLASNIEVSNTVTLDDSIDKAVKTAPGEASKNVHAIRSPNKPHCDSNKIGDVSYQ
SSRDKSLNEKGDDNSQKTISRSPSSMPNGSLETEDPEYAPCRKSKKKHLKRKPKNMPLGL
KSKFFMASLLMHGKKKRKRSKDKDCCSLDLGPSTCEKFSTITLGSVHGRKRTADDTTQKN
GDNSASSLMNTVDVASKERICENGTVLATNQHVGSSSGSVSEANRHNSRETDSLKHHKTG
ASPHRHVLTQCLGEAVVPRWDDIGLTSPMQTAESNGMDGLEIGYVPDEWDEEYDRGKRKK
IRQNKHQFGGPNPFQQIATKKTQLKKDKWDRSSSGNRPFRI
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggaagcaacggtgattagttgctcggaattgagaatcgaagctgagactgaggagtgt
tcggatcttgggaacttttcatcggcttcaggttctactagtgttggcctgtctaagaga
aggatcgtattccatccagcgaggaagccccttaatgggtttaatgattgtgcggatgag
gattttaaaatcgagactctaaaccctgggcgggatccgatgcgggtaaatggggtgcgg
tcggctcaagtgggtgctacaggatggaaggttgacgcatctgatatttgggagaacggg
ttggatccagttctcagtttgaggactacttttcgcaaaattggtgctggtttggagaat
cttgggaacacttgttttcttaattcagtattgcaatgcctgacgtacacagagccttta
gtagcttacctacaaagtggcaaacatcaaaattcttgccacattgctggattttgtgcc
ttatgtgctattcagaaacatgttagccgtgctctaaaatcaactgggaggatattggcg
ccaaatgatcttgtctcaaacctgcgatgcatatctagaaacttccgaaattctagacag
gaagatgcacatgagtacatggtaaacctgctggaatccatgcacaagtgctgcttacct
tcaggagtaccaagtgaatctcctagggcttatgagaagagtttggtgcacaagatcttt
ggtggtcgccttcgcagtcaggtgaaatgcttgcaatgttcttactgctccaacacgttt
gatcccttccttgatttaagtcttgaaatagttaaggcagattccttgcttaaagcactt
aaaaacttcactactgcggagctcttagatggaggggagaggcaatatcaatgcctgcgc
tgcaagcagaaagttagggctatcaaacagctcacagtttacaatgcaccgcatgtactt
acaatccatctaaagagatttcaagcacataatttggggcaaaagattgacaggaaagtt
gaatttggtccgaccatagacatgaagccttttgtcagtggttccaatgaaggatatttg
aagtacactctttatggcgttctggttcatcgcggatggagcacacattctggccactat
tactgttttgtccgcacatcaagtggcatgtggtacacccttgatgacaacagggttttc
caggtcagtgagaagactgttttggagcagaaggcttacatgttgttttacgtccgtgac
agaagaaatactgctacaaaaaattctgttgatattcttcagagagataatgtaaaagca
agtgtggatgggaagtctatttttaatcagaatcctggggaacatgtgcaaactgttcca
attcagaacaagttatctgctgctgtgcctcagaaggatatcattaatggtggcttatca
aaggggacaatcatgaaggaagtgccatctcagcaaaacaatgtgcaactaatggaagaa
gggttagtgctgaaaaaggaggccattttgccctcttttgatgtgccattattgaaggac
ccatcaaaagcatctgcttcaaacctgattcatggtgaaaacttgcaaccatcagcaggt
tctgtggttggcaatgttgcaagttctaagattgaaaatcctactgttagtactggtgcc
aaagatagttactgcaatgagagtggaaactgcaaaagggaatttggagtcccagagatg
gtaccactgaattgtggtggtcttctgaagtcgtgcactgataagattgtaactaaagag
acattgcagaagattaatcttgcttcaaacattgaggtttcaaacactgtcacattggat
gattcaatcgataaagcagtaaagacagctcctggtgaagcatctaagaatgttcatgcg
attaggtctccaaataagccacattgtgacagtaataagattggagatgtttcctaccaa
agtagtagggataagtcattgaatgagaaaggtgatgataacagccaaaaaaccatttcc
agatcaccttcgagcatgccaaatggatcactggagactgaagatcctgaatatgcaccc
tgtagaaaatcaaagaagaagcatctgaagcgtaagcctaaaaatatgcctcttggctta
aaatcaaaatttttcatggcttctctactcatgcatggcaagaagaaacgtaaaaggagc
aaggataaggattgttgttcattagacctggggccatctacatgtgagaaattcagcaca
atcacattaggttcggttcatgggaggaaaaggacagctgatgatactactcagaaaaat
ggtgacaatagtgccagttccttgatgaataccgtagatgtagcatctaaagagaggatt
tgtgagaatggtactgttcttgctactaatcaacatgtaggcagcagttctggctcagtc
tcagaagcaaaccggcataactcaagagaaactgattctttgaaacatcacaaaacaggt
gcatctcctcataggcatgtgcttacccaatgtctaggggaggcagttgttcctagatgg
gatgatataggcttaacctcacccatgcagactgcagaatcaaatggtatggatggtctt
gaaattggatatgtaccggatgaatgggatgaggagtatgaccgtggtaagaggaagaag
ataagacaaaataagcatcagtttggtggtccaaatcctttccaacaaattgccaccaag
aaaacacagttaaagaaggacaaatgggaccgttctagctctggaaaccgaccattcagg
atatga
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