Gossypium hirsutum (upland cotton): 107906915
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Entry
107906915 CDS
T04793
Name
(RefSeq) VAMP-like protein YKT61
KO
K08516
synaptobrevin homolog YKT6
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
107906915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107906915
Membrane trafficking [BR:
ghi04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Ykt6
107906915
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Synaptobrevin
Longin
AcrIIA4
RRM_PARP14_3
EzrA
Motif
Other DBs
NCBI-GeneID:
107906915
NCBI-ProteinID:
XP_016689555
UniProt:
A0A1U8JGY6
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All DBs
Position
D05:complement(4364342..4368901)
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AA seq
199 aa
AA seq
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MKITSLLVLKCNPEGSDPIILANATDVSHFGYFQRSSVREFIVFVARTVAKRTPPGQRQS
VQHEEYKVHAYNRNGLVALGFMDDHYPVRSAFSLLNQVLDEYLKNFGESWRTVHADSAQS
WPYLEEALVKFQDPAEADKLLKIQRELDETKIILHKTIDSVLERGEKLDSLVEKSSDLSA
ASQMFYKQAKRTNQCCTLL
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcacgtcgttattggtgttgaagtgcaacccagaaggatcggatccgatcata
ttagcgaacgcaactgatgtgagccatttcggttacttccaaaggtcaagcgtgagggag
tttattgtctttgttgctcgaaccgtcgccaaacgtacacctcccggccagcgtcagtcc
gtccagcacgaagagtacaaggtacacgcttacaacagaaatggacttgttgccttggga
tttatggatgaccactatcctgttcgaagtgctttttcgcttctcaaccaggtgctagat
gaatacctgaaaaattttggggaatcatggagaactgtgcacgctgatagtgctcaatct
tggccctacctggaagaagctctggtaaaatttcaggatcctgcagaggcagataaatta
ttgaaaattcagagggagttggatgaaactaaaatcatccttcataaaactattgatagt
gtacttgaacgaggtgagaagctggacagtttagttgagaagagttcagatctgagtgcg
gcatctcagatgttctacaagcaggccaagagaaccaatcaatgctgtaccttactgtaa
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