Gossypium hirsutum (upland cotton): 107906933
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Entry
107906933 CDS
T04793
Name
(RefSeq) uncharacterized protein LOC107906933 isoform X1
KO
K19027
zinc finger FYVE domain-containing protein 26
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ghi03400
]
107906933
DNA repair and recombination proteins [BR:
ghi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
107906933
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
Motif
Other DBs
NCBI-GeneID:
107906933
NCBI-ProteinID:
XP_016689576
UniProt:
A0A1U8JH38
LinkDB
All DBs
Position
D05:complement(4194958..4216481)
Genome browser
AA seq
2537 aa
AA seq
DB search
MDKETELLSRLAANHLNLAQFEPLRATLLALRTKNPELALAILQTIVANSGRFENIAWSP
SCPSPALLTYLSTLELLQFNNPTSIWSFDPDTLRLRAEFLLLVQVLIDKVSASLRRDVDL
DKIEKEKESESEGFEEEKPELLDRSDDLKEGNGELGDCVRVLDRFLELGMRRLRPDVVME
GGDADADGEEEHKAVLEKVLIEEEEMVCLRNVIMDYADLFDALCENIQRQLKGLDGDDSG
MAIMIRREEKVIVDSFDEEHKGVLSLIQMSVQLAHLDAMKEYLKDGDIEGVVSRIRFLHL
GYGVEDDVYRTLLRDLLKRVLSEKERFGVSRHSTEEKLLQINGEALSSNCRHLVQMIQVI
HDELLVEEIEMYRSLDNNQIPPPLEHFHKYLVELKTNADLNNKHWPLSMAASSCMRDLFH
FARISGLHVLECVMNTVLSAIKRENIEEATDVLVLFPRLRPLIATMGWDLLSGKTILRRN
LMQFLWVSKSHVFQLEESPLYGNRSDEVSCVEHLCDQLCYHLDIASFVACVNSGQPWSSK
FSLLLSGHENIVSGSEDAKLDTFVENFVLERLSVQSPLRVLFDAVPSIKFQDAIELISMQ
PIASTLEGWKRGQDIELMHMRYALESTVLALGAMGSSMTGEKETHQVALCHLQDLKNHLA
AIKNIPRRILMVNVIISLLHMDDISLNLTHCASPGSLFKQSVECGSEHIDLTIYEGGNKM
AISFTGLLLDIVRHSLPSSTAVEEHASADGLSMSGRQALEWRISMGKRFIEDWEWRLSIL
QRLLPLSERPWSWKEALTILRAAPSKLLSLCMQRAKYDIGEEAVHRFSLSAEDRATLELA
EWVDNAFGNVHVENAVSRAADGTSPVQDLDFSLLRSQLGPLATIFLCIDVAATSARSASM
SLLLLDQAQVMLSEIYPGGSPKVGSTYWDQIHEVGAISVLRRVLKRLHELLERDSPPVLQ
AILTGEISISAAKDSHRLGQKERALALLHQMIEDAHMGKRQFLSGKLHNLARAITDEEME
VNFAKEEGPGSDRKVQSILDKDGVLGLGLKAVNQTSVTSTTGDNSVQSVGYDMMDAGKRL
FGPLSAKPTTYLSQFILHIAAIGDIVDGTDTTHDFNFFSLVYEWPKDLLTRLVFDRGSTD
AAGKVAEIMSADFVHEVISACVPPVYPPRSGNGWACIPVIPTCPRSCSENKVLSPSAKDA
KPSCYSRSSATPGIPLYPLQLDIVKHLVKISPVRVVLACVFGSSMLHSGSDSSISSSLDD
DLLQAPDADRLFYEFALDQSERFPTLNRWIQMQTNLHRVSEFAVTAMQRDDDGKVKPETR
TVIKRLRESDSDTESEVDETVNNSNVTTSLDLNVKDNTSPDPWHDSLKPETAEVDSTVFL
SFGLENEDPYEKAVERLIDEGKLMDALALSDRFLRNGASDRLLQLLIERGEGSHSASGQP
QGYGGHGIWSNSWQYCLRLKDKQLAAGLALKYMHRWELDAALDVLTMCSCHLPQSDPVRN
ELLQRRQALQRYSHILSVDHHHGSWQEVEAECKEDPEGLALRLAEKGAVSAALEVAESAG
LSAELRRELQGRQLVKLLTADPLNGGGPAEASRFLSSLGDSDDALPVAMGAMQLLPNLRS
KQLLVHFFLKRRDGSLSDVEVSRLNSWALGLRVLAALPLPWQQRCSSLHEHPHLILEVLL
MRKQLQSASQILKEFPSLRDNSVIISYAAKAVAVSISSPIREPRISVSGTRPKPKTKSGV
PARSSFTSSLSNLQKEARRAFSWAPRNTGDKTAPKDVYRKRKNSGLSPSERVTWEAMAGI
QEDRVSAYADGQERFPSVSIAEEWVLTGDAGKDEAVRASHRYESSPDIILFKALLSLCSD
EFVSAKSALDLCVNQMKNVLGSKQLPENASMETIGRAYHATETFVQGLIYAKSLLRKLTG
GNDLSSNSERSKDADDASSDAGSSSVGSQTDELSEVLSQADVWLGRAELLQSLLGSGIAA
SLDDIADKDSSGRLRDRLIVDEQYSMAVYTCKKCKIDVFPVWNAWGHALIRMEHYAQARV
KFKQALQLYKGDPAPVILEIINTIEGGPPVDVSAVRSMYEHLAKSAPTILDDSLSADSYL
NVLYMPSTFPRSERSRRSLESSNSNSPYGPDSEDGPRSNLDSARYTECVSYLQEYARQDL
LGFMFKHGHFNDACLLFFPPNGVPTPAQPSTMGVATSSSSPQRSDPLTTDYGTIDDLCDL
CVGYGAMSVLEEVISQRISVAKQQNALINQYTAAALGRICTYCETHKHFNYLYKFQVIKK
DHVAAGLCCIQLFMNSLSQEEAIRHLEHAKMHFDEGLSARYKGGESTKLITKGVRGRSAS
EKLTEEGLVKFSARVAIQVEVVKTFNDADGPQWRHSLFGNPNDQETFRRRCEIAETLVER
NFDLAFQVIYEFNLPAVDIYAAVAASLAERKKGSLLTEFFRNIKGTIDDDDWDQVLGAAI
NVYANKHKERPDRLIDMLTSSHRKVLACVVCGRLKSAFQIASRSGSVADVQYVAHQALHA
NALPVLDMCKQWLSQYM
NT seq
7614 nt
NT seq
+upstream
nt +downstream
nt
atggacaaagaaactgaacttctctcgcgcctagccgcaaaccatctaaacctagctcaa
ttcgaaccgttgcgagccacgcttcttgctctacgaaccaaaaaccccgaacttgctctg
gcaatccttcaaacgatcgtcgccaactcgggtcggttcgagaacattgcctggtcacct
tcttgtccatcgccagctcttttaacttatctttcaactctcgagctcttgcaatttaat
aatcctacatctatatggagcttcgatcccgatacattgcgcttacgagcggaatttttg
ttgttagttcaagttttgattgataaggtctcggctagtctgagaagagatgttgatttg
gataagattgaaaaagagaaggaaagtgagagcgaaggttttgaggaagagaaacctgag
ttgttggacagaagtgatgatttgaaagagggaaatggtgaattgggagattgtgttagg
gttttagataggtttctggaattgggaatgaggaggttgagaccggatgtagtcatggaa
ggtggtgatgctgatgctgatggtgaagaggagcacaaggctgtcttggagaaggttttg
atcgaggaagaagaaatggtttgtttgaggaacgtgattatggattacgcagatcttttc
gatgccttatgtgagaatattcagaggcaattgaaaggattggacggtgatgattcgggg
atggctataatgatacgaagagaggagaaggtgatagtggattcattcgacgaggaacat
aagggggttcttagtttaatacaaatgagtgttcagttagcccatttggatgctatgaag
gaatatctgaaggatggggatattgaaggagtggtttctcgcattcgttttcttcacctt
ggttatggagtcgaggatgatgtgtatcgcacactcttacgagatctactcaagagggtt
ttatcagaaaaggaaagattcggagtgtcccggcattccacagaagaaaagttgttacag
attaatggagaagctctgtcatcaaattgcaggcatcttgtccaaatgattcaagttatt
catgacgagttgcttgttgaagagattgagatgtatagatctcttgataacaaccaaatt
cctccacctcttgagcattttcataagtatttagtggaactgaaaactaatgcagattta
aataacaagcattggcccttgagtatggcagcaagttcttgcatgagagatttgttccat
tttgctcgcatttctgggttacatgtactagagtgtgtgatgaatacggttttatccgcc
ataaaaagggagaacattgaagaggcaactgatgttcttgtactgttccctcggcttcgg
cccctgatagctactatgggttgggatttgctgtctggtaaaacaattttgaggcggaac
ttaatgcaatttctttgggtaagtaaatcacatgtttttcagctggaagaatcacctctc
tatggaaaccgatcagatgaggtatcttgtgtggaacatctctgtgatcaattatgttat
caccttgatattgcctcttttgttgcttgtgtcaattccggtcaaccatggagttcaaaa
ttctcattactattgtctggacatgaaaacatagtatctggaagtgaagatgctaagtta
gacacatttgttgaaaattttgtgttggaaagactttctgttcaatctccccttcgggta
ctgtttgatgctgttccaagcataaagtttcaagatgctattgaattgattagcatgcag
ccaattgcttctactcttgagggctggaaaagggggcaagatattgaacttatgcacatg
cgttatgctttggaatccactgtccttgcactaggagcaatgggaagtagcatgactggt
gagaaagagactcatcaagtggcactatgtcatttgcaagacctaaagaaccatttggcg
gcgataaaaaatattccacgcaggatactgatggtgaatgttataatttcacttttacat
atggatgatatctctctcaatttgacgcattgtgcctcacccgggagcctttttaaacag
tctgttgaatgtggttccgaacatattgatttaaccatatatgaaggtggaaacaaaatg
gctatatctttcacagggttgctacttgatattgtacgtcatagtcttccatcaagcaca
gctgtggaggagcatgcatccgctgatggtttaagcatgtctgggaggcaggctttggag
tggagaatttcaatgggtaaacgtttcattgaagattgggaatggcgattatcaattttg
cagcgccttctcccattatctgaaaggccatggagttggaaggaggcattgactatatta
cgagcagccccgtctaagctacttagtctttgtatgcaaagagcaaaatatgacattgga
gaagaggcagttcatcggttttcattgtctgcagaagacagagctacccttgaattagct
gagtgggtagataacgcatttggaaatgtgcatgtagaaaatgcagtgtctcgggcagct
gatgggacttctccggtacaggatttggatttttcattgttgcgctctcaattgggtcct
ttggctaccatttttctgtgcattgatgttgctgcaacttcggctaggtctgccagtatg
tctctactgcttctggatcaggctcaagttatgttatctgagatatatccgggaggttca
ccaaaggtgggttccacttactgggatcagatccatgaagttggagctatttctgtatta
cgacgtgtcctgaaacgtctgcatgagttattggaacgggatagtcctccagttcttcag
gccattctgacaggggagatctccatttcagcagctaaggactctcatcgactgggacaa
aaagaacgtgcccttgcacttctacatcagatgattgaagatgctcatatgggcaagcgg
cagtttcttagtggtaagcttcacaatctagccagagctattaccgatgaagaaatggaa
gtcaattttgctaaagaggaaggaccaggaagtgatcgcaaagtacaatccattcttgac
aaggatggtgttcttgggcttgggctaaaagctgtcaatcagacatcagtaacttccacg
actggagataatagtgtgcagtcggttggttatgatatgatggatgctgggaagaggctt
tttggccctttaagtgcaaagcccacaacctatttgtcacaatttattctccatattgct
gcaataggtgacatagtggatggaacagatacaactcatgactttaactttttctcactt
gtttatgaatggcctaaagatctcttaactcgtttggtctttgaccgaggcagcacagat
gcagctggaaaagtagcagagataatgtctgctgactttgttcatgaagtgatttcagca
tgtgtacccccggtttatcctccacggtctggtaatggttgggcatgtattcctgtcatc
cccacatgccctcgtagttgttcagaaaataaagtactttctccttctgctaaagacgct
aagcctagctgttacagtcgttcctctgcaacacccgggatccctctttaccctctacaa
ttggatattgtgaaacatttggttaaaatatctcctgtcagggttgtattggcttgtgtt
tttggaagcagtatgttacacagcggcagtgactcttctatatctagctccttggatgat
gatttattgcaggcacctgatgctgatcggttgttttatgagtttgctcttgatcaatct
gaaaggttccctactttgaatagatggatacaaatgcagactaatcttcatagagtttca
gaatttgccgtgacagctatgcaaagagatgatgatggcaaggttaaacctgaaacaaga
actgttattaaaagactgcgagaatctgacagtgacactgagtcagaagttgatgaaact
gtcaataattctaacgtcacaacatccttggacctaaatgttaaggataacacttctcca
gacccatggcatgactccttaaaacctgaaacagccgaagttgatagtacagtttttctt
tcttttggtttagagaatgaagatccatatgagaaagctgtggaacggttgattgatgaa
ggaaagttaatggatgcgcttgcactctctgatcgctttctgcgtaatggagcttcagac
cggttgcttcaactactaattgaacgaggagaaggaagccattcagcctctgggcaacct
cagggttatggggggcatggcatctggagcaatagttggcagtattgcctgcggttgaag
gacaagcaactggcagctggacttgccctcaagtacatgcacagatgggaacttgatgct
gctttggatgttctgaccatgtgcagctgccacctgcctcaaagtgatccagttaggaat
gagctcctgcaaaggagacaagctttgcagcggtacagccatatattaagtgtagatcat
caccatggaagctggcaagaggttgaagctgagtgtaaggaagatcctgaaggcttagcg
ctaagattagctgagaaaggagctgtttctgctgctttagaagttgctgaaagtgctgga
ttatcagcagaactgcggagagaacttcagggccgacagcttgtgaagcttctcacagcg
gatcctttgaatggtggaggaccagcagaagcttcccgttttttatcatcactaggtgac
tctgatgatgctctaccagtcgctatgggtgcaatgcaactattacccaaccttcggtca
aaacaacttcttgttcacttcttcttgaagcgaagagatgggagtctgtcagatgttgag
gtttctcgacttaactcgtgggctttaggccttcgtgttctagctgccttaccactgcct
tggcagcaacgatgttcttccttgcatgagcacccacatttaatattggaggttctactg
atgaggaaacaactgcaatctgcctcacagatccttaaagagtttccttctttgagagac
aacagtgttatcatatcatatgctgctaaagctgttgctgtcagtattagctctccaatt
cgggagcctcggatatctgtttctggaacacggccaaaaccaaaaacaaaatcaggtgta
cctgcaaggtcatccttcactagtagtttaagcaacttgcaaaaggaggctcgtagagct
ttttcttgggctccacgtaatactggggacaagactgcccccaaagatgtttatcggaaa
agaaagaattctggtctgtcaccttctgaaagagttacttgggaggcaatggctgggatt
caagaggatcgtgtatcagcatatgcggatgggcaagagcggtttccttctgtctcaatt
gctgaggaatgggtgctaacaggtgatgctggtaaagatgaagctgttcgagcatctcac
agatacgaaagttcccctgacattattctcttcaaggcattgctttccttatgttctgat
gagtttgtgtctgcgaagagtgccctagacttatgtgttaatcagatgaaaaatgttttg
ggctccaagcagttgcctgagaatgcatcaatggaaacaattggtcgagcatatcatgct
actgagacatttgtccagggactaatatatgctaaatcgctgttgaggaaactcactggt
ggcaacgatttgtctagtaattctgaaagaagcaaggatgctgatgatgcatcctctgat
gctggtagctcaagtgtgggtagccagacggatgagttatctgaagttttgtcacaagca
gatgtttggctgggacgtgctgagcttcttcaaagccttctgggatctggcatcgctgct
tctcttgatgatattgctgacaaggactcatctggccgtctccgtgacaggttgattgtt
gatgaacagtatagcatggctgtgtatacttgcaagaagtgcaagattgatgtttttcct
gtatggaatgcatggggacatgctttgattcggatggagcattatgcgcaagcgcgtgtg
aagtttaagcaagctcttcaactttacaagggtgatcctgcacctgtcattctagagatc
attaatacaattgaaggaggtccacctgtggacgtgtcagctgttcgttccatgtatgaa
catttggccaaaagtgcaccaacaatcttggatgattctctttctgccgattcatatcta
aatgttctgtacatgccatctaccttccctcgttcagagagatcaaggcggtctctagaa
tcttcaaatagtaattctccatacggccctgactctgaagatggaccacgtagtaacttg
gacagtgctcgttatactgagtgtgttagctatttgcaagaatatgctcgtcaggatttg
cttggatttatgtttaagcatggtcacttcaatgatgcatgcttgttattctttcctcct
aatggtgttcctacacctgctcaaccttcaacaatgggagtagcaacttcatcatcgtcc
cctcaaagatcagaccccttgacaactgattatggaaccattgatgatttgtgtgacttg
tgcgttgggtatggtgccatgtcagttctggaggaagtgatttcacaaaggatttcagtt
gcaaaacagcagaatgcattgataaatcaatatacagctgctgcacttggccgtatttgc
acttattgtgaaactcataagcactttaattatctatacaaatttcaggtaatcaagaag
gatcatgttgcagccggactctgttgtatccagttatttatgaattctttgtctcaagag
gaagctatcagacatttggaacatgctaagatgcattttgatgaggggttatcagcacga
tacaaaggtggagaatctaccaagctgatcacaaagggcgttagaggaagaagtgcctct
gagaagcttacagaagaaggacttgtcaagttttctgctagagtggcaatccaggtggaa
gttgtgaaaacttttaatgacgctgatggaccacagtggagacattcactttttggaaat
ccaaatgatcaagaaacctttaggaggaggtgtgagattgcagaaactcttgttgagagg
aactttgatttggcattccaagttatttatgaatttaatcttccagctgttgacatatat
gctgctgttgctgcatcgcttgctgaaaggaaaaagggcagcctgttgacggaatttttc
agaaacattaaaggaacaattgatgatgatgattgggaccaggtattgggggctgctatt
aatgtgtatgctaacaaacacaaggaacgcccagaccgtctcattgacatgctgactagt
agtcacaggaaagtgctggcatgtgtggtttgtggtcgcctaaaaagtgctttccagatt
gcatctcgaagtggaagcgtggctgatgttcaatatgttgcacatcaggctttacacgcc
aatgctcttcccgtgcttgatatgtgtaaacaatggctgtctcagtacatgtaa
DBGET
integrated database retrieval system
