Gossypium hirsutum (upland cotton): 107907012
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Entry
107907012 CDS
T04793
Name
(RefSeq) zinc finger protein GAI-ASSOCIATED FACTOR 1-like
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ghi03000
]
107907012
Transcription factors [BR:
ghi03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
107907012
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_6
zf-C2H2_jaz
zf-met
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
107907012
NCBI-ProteinID:
XP_016689692
UniProt:
A0A1U8JH94
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Position
D05:3538215..3541347
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AA seq
523 aa
AA seq
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MMKGLVVDESISNLTSTSGEVSASTNQEPLSKKKRTLPGNPDPEAEVIALSPKTLLATNR
FICEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKEVVRKKVYVCPETTCVHHHPSRALG
DLTGIKKHFCRKHGEKKWKCSKCSKRYAVQSDWKSHSKICGTREYRCDCGNLFSRRDSFI
THRAFCDALAEETARAITAANQPGSSVSHINMTNLESQPLLHGYALNATSLNRDQDHRFN
ARVEAAGPDSGPPSINLSSSPFLLGHPLPHDENPSQNPSSTTLLPFQAPPASPHTSATAL
LQKAAQMGVTLSKPLQSPVVSMQRPYYYHHQAHMCGSTTFATSRAWGLSAREELGSEFTH
SLSSFGNKARVTPGFLEQVANAPKSNAGAGAGAAAPSSLLHDMMTSLSGTSELEGSSSFE
QSFNGTWITKRNSNKFQENYIDHHNFSETKESQSCRSDNHEGKGSGSSSSNNIRGNDGLT
RDFLGLKAFPHTDIPNLVGLNHHVNSSSAYGQPNQHSETPWQG
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaaggtttggtggtggatgagagcatttcgaatttgacttcaacatctggtgaa
gtaagtgcttcgacaaatcaagaaccattatcaaagaagaagagaactctaccaggcaac
ccagacccagaggctgaagtcatagctttgtctcccaagacactgcttgcaacaaataga
tttatatgtgagatctgtaacaaagggtttcaaagagatcagaatcttcagcttcataga
agaggacataacttgccatggaaactaaagcaaagaacaaacaaggaagtggtgaggaag
aaggtatatgtatgtccagagacaacatgcgtgcaccatcacccatctagggctcttggt
gacctcacgggaatcaagaagcacttttgcagaaaacatggggagaagaaatggaagtgt
tcaaagtgttcaaagcgttatgctgttcaatctgactggaaatctcattccaaaatttgt
ggcaccagagagtatagatgtgactgtgggaaccttttctccaggagggacagtttcatc
actcacagagcgttttgcgatgctttagctgaggagactgctagagcaattacagctgca
aaccaacctggttcttctgtttcacacataaatatgaccaatctagaatcccaaccccta
ctccatggctatgccctcaatgcaacatctttgaatagagaccaagatcatcgtttcaat
gcaagagtagaagctgctgggcctgattctggtcccccctcaataaatctttcatcatca
ccatttcttttaggccacccactgccacatgacgaaaaccctagccaaaaccctagttct
actacacttcttccattccaagctccgccagcttctccacacacgtctgcaaccgcactc
ctacaaaaagcagctcaaatgggggtgactttgagcaagcccttacaatcaccagtggta
tccatgcaaagaccttactactaccaccaccaggctcacatgtgtggttccacaactttt
gccacgtctagagcttggggtttgtcggcacgtgaagagttgggaagtgagttcacccac
agtttgtcatcttttgggaataaagctcgtgtcacccctggtttcttggaacaggtggct
aacgcaccaaagagtaatgcaggtgctggagccggtgctgcagctcctagttctctactc
catgatatgatgacttctttatctggtacaagtgagctagaagggtcttcatcttttgaa
cagtctttcaatgggacatggatcaccaaaagaaacagcaataaatttcaagaaaattat
atcgatcatcataatttctcagaaacaaaagaatcccaatcatgcagaagtgataatcat
gaaggtaaaggaagtggtagtagtagtagtaataacataagagggaacgatgggttgaca
agagatttcttgggtcttaaagctttcccacatacagatatccccaacttagtagggctt
aatcatcacgtaaactcttcttcagcatatggacaaccgaaccagcacagtgaaacacca
tggcaaggttag
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