Gossypium hirsutum (upland cotton): 107907020
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Entry
107907020 CDS
T04793
Name
(RefSeq) eukaryotic initiation factor 4A-9
KO
K03257
translation initiation factor 4A
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107907020
03012 Translation factors [BR:
ghi03012
]
107907020
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ghi04147
]
107907020
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
107907020
mRNA cycle factors
Stress granule specific factors
107907020
Translation factors [BR:
ghi03012
]
Eukaryotic type
Initiation factors
eIF-4
107907020
Exosome [BR:
ghi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
107907020
Exosomal proteins of bladder cancer cells
107907020
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
CMS1
Flavi_DEAD
DUF8050
Motif
Other DBs
NCBI-GeneID:
107907020
NCBI-ProteinID:
XP_016689701
UniProt:
A0A1U8PJ67
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Position
D05:3485744..3488891
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AA seq
412 aa
AA seq
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MAAAAPEGSQFDARQYDAKMDELEAVGQDFFTSYDEVYDTFDVMGLQENLLRGIYAYGFE
KPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYSLVQCQALVLAPTRELA
QQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRPD
HIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRI
LVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRS
RDHTVSATHGDMDQNARDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPE
NYLHRIGRSGRFGRKGVAINFVTTDDERMLYDIQRFYNVVIEELPSNVADLI
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgcagctccagagggttctcaatttgatgctcgccagtatgatgctaaaatg
gatgaacttgaagctgtggggcaagatttctttacctcatatgatgaggtttatgacact
ttcgatgttatgggattgcaagaaaatcttcttaggggcatttatgcttatggttttgag
aagccatctgcaattcagcaaagaggaattgtacccttttgcaagggacttgatgtaatt
caacaagcacaatccggaacaggaaaaactgcaactttttgctctggaattctacagcag
cttgactacagcttagttcagtgccaagcattggtccttgcaccaacccgtgaactagca
caacaaattgagaaggtcatgcgggcattaggtgattaccttggtgtcaaggttcatgct
tgtgtaggtgggaccagtgtccgtgaagatcaacggattctctccagtggggttcatgtg
gttgttggtacacctggccgtgtatttgacatgttgaggagacaatctctccgccctgat
catataaagatgtttgttttggatgaagctgatgaaatgctctcaagaggcttcaaggat
cagatctatgatattttccagttattgccacctaaaattcaagtaggagtgttttctgct
acaatgcctcctgaagccctagaaatcacaaggaagttcatgaacaaacctgtgaggatt
ctggtgaaacgtgatgagcttacccttgagggtatcaagcaattttatgtcaatgttgag
aaggaggaatggaagcttgagacactttgtgatctctatgagaccttagcaatcacccaa
agtgtcatttttgtgaacactaggcgtaaggttgattggcttacagataagatgcgtagc
cgtgaccatacagtgtctgctacccatggagatatggaccaaaatgcaagggacattatc
atgcgggaattccgatctggatcctctcgcgtgcttatcaccactgatctcttagctcgt
ggtattgacgttcagcaagtctcacttgtgatcaattatgatctcccaacacaaccagag
aactaccttcatcgaattggtcgtagtggaagatttgggagaaaaggtgttgccatcaac
tttgtaaccacagatgatgagaggatgctatatgacatccagaggttttataatgttgta
attgaggagctgccatcaaatgttgctgatctaatttga
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