Gossypium hirsutum (upland cotton): 107907075
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Entry
107907075 CDS
T04793
Name
(RefSeq) uncharacterized protein LOC107907075
KO
K20523
SH3 domain-containing YSC84-like protein 1
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107907075
Membrane trafficking [BR:
ghi04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
107907075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ysc84
FYVE
FYVE_2
Motif
Other DBs
NCBI-GeneID:
107907075
NCBI-ProteinID:
XP_040949067
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All DBs
Position
D05:3139743..3142495
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AA seq
483 aa
AA seq
DB search
MASLEGGVSFSYLSKLEKGNKNAFQFDDDYRDAVWTVPQDKSIVPLGSKSMKNDYLYQFR
AESDDFIDGEYDSGDDVSKSMQNGLYPEVNLKNVLSGLVAIVTGRNKGSLGASVDQQYQS
SNVSFLGSEKNGDTYLHSSVYIPSAPPLLESSGIDYNAYKEVLEAEPPEWIPDSSTSVCM
QCSAPFTALTRGRHHCRFCGGIFCRACSKGRCLLPVKFRERNPQRVCDSCYDRLDPLQGV
LINTISNAVQVAKHDVMDWTCTRGWLNLPFGLSMEHEIYKASNTLRSYCQVARLNPERSI
PWAVLRGAKGLAILTVVKAGVLVAYKLGTGLVIARRSDGTWSAPSALCSVGLGWGAQIGG
ELMDFIIVLHDSKAVKTFCSRMHFSLGAGCSAAAGPVGRVLEADLRAGDGGSGMCYSYSC
SKGAFVGVSLEGNIVATRMDTNLRFYGDPYLTTADILLGTVDRPKAAEPLYAALHNLYSS
LRF
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggcaagccttgagggtggcgtttcattttcatacctttcaaagctagaaaagggaaat
aaaaacgcctttcaattcgatgatgattatagggatgctgtttggaccgtgccacaagac
aaaagtattgtcccattaggctcaaagtcgatgaaaaacgattacctctatcagtttcgg
gctgagtccgatgattttattgatggagaatacgattctggtgatgatgtctctaagtca
atgcaaaatggcttgtatcctgaggtgaacttgaagaatgtgttgagtgggttagttgca
atcgtaactgggcgtaataaaggctcccttggtgcttctgtggatcagcaataccaaagt
tctaatgtatcatttctggggtctgaaaagaatggagatacatatttgcactcctctgtt
tatataccaagtgctccgccacttctggagtcaagtgggatagattataacgcatataag
gaggttttggaagctgagcctccggagtggattccggatagttctacttcagtttgcatg
cagtgtagtgctccatttactgcacttacacgtggcagacatcattgccggttttgtgga
gggattttctgcagagcatgttctaagggaaggtgcttgctacctgttaaatttagggaa
agaaatccccagagggtgtgtgattcttgctatgataggcttgatccgttgcagggtgtt
cttatcaataccattagcaatgctgtccaagtagcaaaacatgatgtcatggattggacc
tgtacacgtggttggttgaacttaccatttggtttgtccatggaacatgagatctacaaa
gcatccaatacgttgagaagctattgccaggttgctaggttgaatccagagagatctata
ccatgggctgtcttgagaggagccaaaggtttagctattttaactgttgttaaagctgga
gttcttgttgcatataaacttgggactggtcttgttattgctcgaaggtcagatggaaca
tggtctgccccatcagctttgtgctctgttggtttaggatggggtgctcagatcggaggc
gagctcatggatttcataattgtgcttcatgattcaaaagctgtgaagacgttttgtagt
cgaatgcatttttctctaggtgctggctgcagtgctgctgcaggacctgtggggagagtg
ctggaagcagatcttcgagccggggatggtgggtccggcatgtgctacagttatagttgt
agcaaaggggcgtttgttggtgtgtcattggaagggaacattgttgcaacaagaatggat
accaacctacggttctatggcgatccgtatctcaccactgctgacatattactggggacc
gtggacagaccaaaagctgctgagcccttgtatgctgcactacataacctctactccagc
ctacgcttttag
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