Gossypium hirsutum (upland cotton): 107907116
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Entry
107907116 CDS
T04793
Name
(RefSeq) myosin-17 isoform X3
KO
K10357
myosin V
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
107907116
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107907116
04131 Membrane trafficking [BR:
ghi04131
]
107907116
03029 Mitochondrial biogenesis [BR:
ghi03029
]
107907116
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ghi04812
]
107907116
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
107907116
mRNA cycle factors
P-body specific factors
107907116
Membrane trafficking [BR:
ghi04131
]
Others
Actin-binding proteins
Myosins
107907116
Mitochondrial biogenesis [BR:
ghi03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
107907116
Cytoskeleton proteins [BR:
ghi04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
107907116
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_22
AAA_16
nSTAND3
CbiA
Tropomyosin
Motif
Other DBs
NCBI-GeneID:
107907116
NCBI-ProteinID:
XP_016689835
UniProt:
A0A1U8JHT4
LinkDB
All DBs
Position
D05:2870902..2884924
Genome browser
AA seq
1530 aa
AA seq
DB search
MAAPVNIIVGSHVWVEDPALAWVDGEVFKISGEEVHVHTTNGKTAVANISKVFPKDTEAP
PGGVDDMTKLSYLHEPGVLHNLAMRYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQY
KGAGFGELSPHVFAVADVAYKAMMNEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRS
GVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAVRTYLLE
RSRVCQISNPERNYHCFYLLCAAPPEVREKFKLGDPKSFHYLNQSSCYALDGVDDAQEYL
ATIRAMDIVGISEEEQEAIFCVVAAILHLGNIEFAKGADVDSSVIKDEKSRFHLNMTAEL
LKCDIKSLENALIKRVMVTPEEIITRTLDPVAAVGSRDALAKTIYSRLFDWLVDKINFSI
GQDPNSKQLIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEIN
WSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLFQTFKNNKRFIKPKL
SRTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQDLLTASKCSFVASLFPPPAEESSKSS
KFSSIGSRFKLQLQSLMETLNSTEPHYIRCVKPNNVLKPAIFENASIIQQLRCGGVLEAI
RISCAGYPTRRTFYEFLHRFGVLAPEILAGNHDDKVACQMILDKMGLKGYQIGKTKIFLR
AGQMAELDARRAEVLGNAARTIQRQIRTYIARKEFIELRKAAIMLQSHWRGILACKLYEQ
LRREAAALKIQKNFRRHIARESYLTVRQSAITLQTGLRAMTARNEFRFRKQTKAAIIIQA
AFRCHVAYSYYKSLQKAALTTQCGWRRRVARRELRKLKMAARETGALKEAKDKLEKRVEE
LTWRLQLEKRLRTDLEEEKAQEIAKLHDALHAVQIQVEEANARVIKEQEAARKAIEEAPP
VIKETPVIVEDTEKVNSLAAEVENLKASLLSETKAAEEARNACTDAETRNAELVKKLEES
ERKVDQLQESVQRLEEKLANSESEIQVLRQQSLAISPTGKSLTARQRTMILPRTPENGNV
LNGETKVPSDTTLALSNVREPESEEKPQKYLNEKQQENQDLLIKCISQNLGFSGSKPIAA
CVVYKCLLHWRSFEVERTTVFDRIIQTIASAIEVQDNNDVLAYWLSNSSTLLLLLQHTLK
ASGAASLTPQRRRATSASLFGRMSQGLRASPQSAGLSFLSGRGLSRLDDLRQVEAKYPAL
LFKQQLTAFLEKIYGMIRDNLKKEISPLLGLCIQVPRTSRASLVKGRSKSNAVAQQALIA
HWQSIVKSLDRYLKIMKSNHVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYV
KAGLAELEQWCSEATEEYAGSAWDELKHIRQAVGFLVIHQKPKKSLNEITKELCPVLSIQ
QLYRISTMYWDDKYGTHSVSSDVIAKMRVMMTEDSNNAVSSSFLLDDDSSIPFTVDDISK
SLQQVDITDIDPLSLIRENSGFGFLLPRSE
NT seq
4593 nt
NT seq
+upstream
nt +downstream
nt
atggctgctccagttaacattattgtaggttctcatgtatgggttgaagatcctgcactt
gcatgggttgatggagaagtttttaaaatcagcggtgaagaagttcatgtccacacaaca
aatggaaaaaccgctgtggcaaatatctcaaaggtatttccaaaagatactgaggcacct
cccggaggtgtcgatgacatgacgaagctttcatatttgcatgaacctggagtgctgcat
aacttggccatgagatatgaacttaatgaaatctatacatacactggaaatatcttgatt
gctataaatccattccaaaggttgccacacctctatgatactcacatgatggaacaatat
aaaggggctggatttggcgagctgagtcctcatgtttttgctgttgcagatgttgcatat
aaggcaatgatgaatgagggaaaaagcaactcaattctcgttagtggagaaagtggtgct
ggtaagactgagactacaaagatgctcatgcgataccttgcataccttggtggtcgatct
ggagttgaagggcggactgttgaacaacaagttctagaatctaatcctgttcttgaagct
tttggaaatgcaaaaactgttagaaacaacaactcaagtcgctttggtaaatttgttgag
attcaatttgataagaatgggaggatttctggggctgctgttcgtacatatttgctggaa
cggtctcgagtttgtcaaatttcaaatcctgaaagaaattaccactgcttttaccttctt
tgtgcagcaccgcctgaggttagagaaaagtttaaattgggagaccctaaatctttccat
tacctcaatcaatcgagttgctatgcattggatggggtagatgatgctcaggagtacctt
gcaactataagggccatggatatagttggaatcagtgaagaagagcaggaggcaattttt
tgtgttgtggctgccattttacatcttggaaatattgaatttgcaaagggagctgatgtt
gactcttcggttatcaaggatgagaaatctaggttccatcttaatatgacagctgaactg
ctcaaatgtgatatcaagagcttggaaaatgcattaataaagcgtgtgatggttacccca
gaagaaattattacaagaactctggatccagttgctgcagttggtagcagggatgcatta
gctaaaacaatctattctcgcttgtttgattggcttgtggataagatcaacttttcaatt
ggacaagatccaaactctaagcaattgattggagtacttgatatttatgggtttgagagc
tttaagcttaatagttttgaacagttttgcataaattttactaatgaaaaactgcagcag
catttcaatcagcatgtttttaaaatggaacaggaggaatacacaaaagaagaaattaat
tggagctacatagaatttgttgataaccaggatgttttggatttgatagagaagaaacct
ggaggaataatcgcgcttcttgatgaagcttgtatgtttcctaaatccacacatgaaaca
tttgctcagaagttgtttcagacattcaaaaacaacaagcgctttatcaaaccgaaacta
tctcgtactagttttacaatttctcactatgctggagaggtaacttatctggctgatttg
ttccttgacaagaacaaagattatgtagtggctgaacatcaggatctcttgacagcctca
aaatgctcctttgtggctagtttgtttcctcctcctgctgaggagtcctcaaaatcatcc
aaattttcatccattggatcacgctttaagctacaacttcaatctttgatggagacgttg
aattcaacagagcctcactatattagatgtgtgaagccaaacaatgtcctcaagcctgct
atttttgagaatgccagtataattcagcaattaagatgtggtggtgttcttgaggcaatt
aggatcagctgcgcaggatatccaacaagaagaacattttatgagtttcttcatcgtttt
ggtgttcttgctccagaaattttggcggggaatcatgatgacaaggttgcatgtcaaatg
atccttgacaagatgggattgaaaggttatcagataggtaagaccaaaattttccttaga
gctggtcagatggctgagttagatgccagaagggcagaagtgcttggaaatgcagccaga
accattcaaagacagattcggacatatattgcacggaaggaattcattgaactacgtaaa
gcagcaattatgttgcagtcacattggcgaggtatactagcctgcaagctatatgagcag
ttgagaagggaagcagccgctttgaagattcaaaagaactttaggcggcacattgccagg
gaatcctatttaacagtaaggcagtccgcaatcacattgcagactggcttaagggcaatg
actgctcggaatgaattcagattcagaaagcaaactaaggctgcaattatcattcaggct
gctttccgttgccatgttgcatactcttattataagagtctccagaaagctgcattaact
actcaatgtggttggaggagaagggttgctaggagagagctcagaaagctcaagatggct
gcccgagaaacaggggctctcaaagaagcaaaagacaagctggaaaaacgtgtagaagaa
cttacatggcgtttgcagcttgagaaacgtttgaggactgatttagaagaggagaaggca
caagaaattgccaagttgcatgatgctttgcatgcagtgcaaatacaagtggaagaagca
aatgctagagtcataaaagagcaagaggctgctcggaaagctattgaggaagctcctcca
gttattaaggagactcctgttattgttgaggacacagaaaaggttaattccttggctgct
gaagtagagaatttgaaggcttcgttgctatctgaaacaaaggcagcagaagaggctcgt
aatgcttgtacagatgctgaaaccagaaatgcagagctggtgaagaaacttgaagagtct
gagcgaaaagtggaccaacttcaggaatcagtgcagaggctggaagagaagcttgccaat
tcggaatccgagattcaagtacttcgccagcagtcactggcaatatctccaaccgggaaa
tctttgactgcaagacaaagaacaatgattcttcctaggacaccagagaatggaaatgtt
ctaaatggagaaacaaaggtcccatcggatacaactcttgccttatcaaatgtacgtgag
cctgaatctgaggaaaagcctcagaaatacctcaatgaaaagcagcaggagaatcaggac
ctactgatcaagtgtatatcacaaaatttgggattttccgggagcaagccgattgctgct
tgtgtcgtatacaaatgtcttcttcactggaggtcatttgaagttgaaagaacaactgtt
tttgaccgcatcattcaaacaatagcttctgccatagaggtccaggacaataatgatgtc
ttagcctattggttatctaattcatcgacattgttactgctgctccaacacacacttaaa
gcaagtggagctgccagtttgacaccacaaagacgaagagcaacatcagcttcactcttt
gggaggatgtctcaaggtctacgggcatctccccaaagtgctggactttcatttctcagt
ggtcgtgggcttagtagattagatgacttacggcaagttgaggccaagtatcctgcatta
ctgtttaagcagcagcttactgccttccttgagaagatatatggaatgataagagacaat
ctgaagaaagagatctctccattgcttggcttgtgtattcaggttcctaggacatcacgg
gcaagtttggtgaaggggcgttctaaatcaaatgctgttgctcagcaagctttaattgct
cattggcaaagcattgtgaaaagcttggatcgctatttgaagataatgaaatctaaccac
gtacctcccttcctagtccgtaaagtattcactcaaattttctcattcatcaacgttcag
ctattcaacagtcttcttttgagacgtgagtgttgctcattcagtaatggggagtatgtg
aaagctggtctggctgaattagagcagtggtgcagtgaggcaactgaggaatatgcaggt
tcggcatgggatgaactgaaacacataagacaggctgttggattcctggttattcatcaa
aaacccaaaaagtccttgaatgaaataactaaagaactttgcccggtacttagcattcaa
cagttatacagaatcagcacaatgtattgggatgacaaatatggcactcatagcgtgtca
tcggatgtcattgcaaaaatgagagttatgatgaccgaggactccaacaatgctgttagt
agttctttcctattagacgatgactcaagcatcccatttacggtggatgacatctccaag
tccttacaacaagtggacataactgatattgatcccctgtcactaattcgagaaaactct
ggttttgggttcttacttccacgttcggagtga
DBGET
integrated database retrieval system
