Gossypium hirsutum (upland cotton): 107907182
Help
Entry
107907182 CDS
T04793
Name
(RefSeq) serine/threonine-protein kinase VPS15 isoform X1
KO
K08333
phosphoinositide-3-kinase, regulatory subunit 4 [EC:
2.7.11.1
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
107907182
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ghi01001
]
107907182
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107907182
Enzymes [BR:
ghi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
107907182
Protein kinases [BR:
ghi01001
]
Serine/threonine kinases: Other
VPS15 family
107907182
Membrane trafficking [BR:
ghi04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
107907182
Autophagy
Autophagosome formation proteins
PI3K complex
107907182
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS15-like_hel
Pkinase
WD40
WD40_WDHD1_1st
WD40_Prp19
WDR55
WD40_CDC20-Fz
HEAT
PK_Tyr_Ser-Thr
EIF3I
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_EML_2
WDR90_beta-prop_4th
Beta-prop_TEP1_2nd
HEAT_EZ
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Cohesin_HEAT
APH
TCAD9
Motif
Other DBs
NCBI-GeneID:
107907182
NCBI-ProteinID:
XP_016689928
UniProt:
A0A1U8JMK4
LinkDB
All DBs
Position
D05:complement(2397057..2405295)
Genome browser
AA seq
1549 aa
AA seq
DB search
MGNKIARTTQVSATEYYLHDLPSSYNLVLKEVLGRGRFFKSILCKHDEGLVLVKVYFKRG
DSIDLREYERRLVHIKEIFRSLEHPHVWPFQFWQETDKAAYLLRQYFFNNLHDRLSTRPF
LSLVEKKWLAFQLLLAAKQCHEKGICHGDIKCENVLVTSWNWVYLADFASFKPTYIPYDD
PSDFSFFFDTGGRRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAIGCVIAELFLEGQP
LFELSQLLAYRRGQYDPSQHLEKIPDIGVRKMILHMIQLEPESRLSAESYLQNYVAAVFP
SYFSPFLHGFYRCWNPLHSDMRIAMCQRVFPEMLKQMMSKRSSDEMGKGLGKSHTLSGHL
SQEIVAKQQSEEIAPKQKLSSANHLLTKREKIDNASIRDQFKLPGNINTLLGDVEQSNHY
LGEKSTRGDTPKYELSQDFKQHGMQSPVLHQNISDLFRKNDHPFLKKITMDDLNSLMSDY
DSQSDTFGMPFLPLPQDSMKCEGMVLVASLLCSCIRNVKLPHLRRGAILLLKTSSLYIDD
EDRLQRVLPYVIAMLSDPAAIVRCAALETLCDILPLVREFPPSDAKIFPEYILPMLSMLP
DDPEESVRICYASNIAKLALTAYGFLIHSIRLSEAGVLNETNLPQKSLASSGESSGRIQR
SNSDAQLGQLRKLIAEVVQELVMGQKQTPNIRRALLQDVGNLCCFFGQRQSNDFLLPILP
AFLNDRDEQLRAVFYGQIVFVCFFVGQRSVEEYLLPYIEQALGDAREAVIVNALDCLAVL
CNSGFLRKRILIEMIERSFPLLCYPSQWVRRSVVTFLASSSECLGAVDSYVFLAPVIQPF
LRRQPASLDSEKALLSCLKPPVSREVFYEVLQNARSSDMLERQRKIWYNSSAQSKQWEIA
DLLERGTGELDSMKYWSEKQQSNGSHRPIDSVLQQSGLTEAADDDAKLRALGCNTRNASS
AIDMHDPLCLEKLQFSGLTSPQLNGLNSFMCDKSSEGIPLYSFSMDKRATVAPSAASDTP
LPWMDPISKSFSLASSVPTPKLVSGSFGITAGSKQFYRVVHEPESRENDQIANANSKFQD
MGLSGTVKGSSVRMEDASTSTDFTGLPSFSRSSSIPDSGWRPRGVLVAHLQEHRSAVNDI
AVSNDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTAMLRNSAQVVVG
ACDGTIHMFSVDHISKGLGNVVEKYSGIADIKKKDVKEGAILTLLNYPIDNCGIQTFMYS
TQNCGIHLWDTRSSSNAWTLKAIPEEGYISCLVAGPCGNWFVSGSSRGVLTLWDLRFRIP
VNSWQYSLVCPVEKMCLFVPPSSVSVSTTARPLIYVAAGCNEVSLWNAENGTCHQVFRAA
NYDSDAEMSDLPWALARPSAKTSSKSDPRRNANPRYRVDELNEPPPRVPGIRSLLPLPGG
DLLTGGTDLRIRRWDHFSPDRSYCMCGPNFKGVGNDDFYEARSSFGAQVVQETKRRPLTT
KLTAKAVLAAAATDSAGCHHDSVLSLASVKLNQRLLISSGRDGAIKVWK
NT seq
4650 nt
NT seq
+upstream
nt +downstream
nt
atggggaacaagatcgcgcgaacgacgcaggtctcggcgacggagtattacctgcatgac
ctgccgtcttcgtacaatctggtgttgaaggaggtgcttggtcgaggccgattcttcaag
tcgatcctatgtaagcacgacgaaggtctcgtcctcgttaaggtctacttcaagcgtggc
gattccatcgatctccgtgagtacgagcgtcgactcgttcacatcaaagaaatctttcgc
tcacttgaacacccccacgtttggcccttccagttttggcaagaaacggacaaagcggcc
tatttgttaaggcaatactttttcaataatttacatgatcgattaagtactcggcccttt
ctgagtctcgttgaaaagaagtggttggcgtttcagttgcttcttgcagcgaagcagtgc
cacgagaaggggatatgccatggtgatattaaatgtgagaatgtgttggttacctcgtgg
aactgggtttatcttgctgattttgcctcattcaagcccacatatattccttatgacgac
ccttcagatttctccttcttctttgacaccggaggaagaaggctgtgttatcttgcacca
gagagattttatgagcatggaggtgaaatgcaagttgctcaagatgcacctttgaaacca
tctatggacatctttgctattggatgtgtaattgctgagcttttccttgagggccagccg
ctgtttgaactctctcagcttcttgcatatcgcagagggcaatatgatcctagtcaacat
cttgaaaagatcccagatattggagtgcgcaagatgatacttcatatgatccaacttgaa
ccagagtctcgcctatctgctgaaagttatctacagaattatgtagctgctgtatttcct
agctacttctccccatttctgcacggattttatcgttgctggaatcctcttcattctgat
atgaggattgcaatgtgccagagagtgttccctgagatgctgaagcaaatgatgagcaag
aggtcaagtgatgagatgggaaaaggacttggcaagtcacataccttaagtggtcatttg
tcgcaagaaattgttgcaaaacaacagtcagaagagattgctccaaaacaaaagttaagc
tcagcaaatcacttgttgacaaaaagagaaaagatagataatgcttctattagggatcag
ttcaagcttcctggaaacattaataccctacttggggatgttgaacagagcaatcattac
cttggggagaagtcaacaagaggggatacacctaaatatgaactttcccaagattttaaa
caacatggcatgcaatctcctgtccttcatcaaaatatttctgatttgtttaggaaaaat
gatcacccttttttaaaaaagattaccatggatgatttaaactcattgatgtctgactat
gacagtcaatcagacacgttcggaatgccttttctgccattacctcaagacagtatgaaa
tgtgaagggatggtgctagtcgcctctctgctttgttcttgcatacgtaacgttaagttg
cctcacttaaggagaggggctatacttttgctgaagacttcttcactatacatcgatgat
gaagatcgcttgcagcgagtgcttccgtatgtaattgcaatgctttcagacccagcggca
attgtgcggtgtgctgcccttgagactttgtgtgacattctgcccttagttcgagaattt
cctccaagcgatgccaaaatttttccggagtatattcttccaatgctttccatgcttcct
gatgatccagaggaaagtgtgagaatttgttatgcaagcaatatagctaagctggctcta
acagcttatggattcttgattcattcaataaggcttagtgaggctggggttcttaatgaa
acgaatttgccacagaagtcattagcgtcatctggtgagtcatctgggcgtattcagagg
tcaaacagtgatgcacagttaggccaattgaggaagttgattgctgaggtagtacaggaa
cttgtaatgggtcaaaagcaaactccaaacattagaagagcactccttcaggacgttggc
aacttatgctgcttttttggccagcgacagagcaatgactttttgttgcccatacttcca
gcttttttgaatgatagagatgagcagctaagggcagtgttctatgggcaaattgtgttt
gtctgcttctttgtgggccaacgaagtgtagaggaatatcttttaccttatattgagcag
gctttaggtgatgcaagagaggctgttattgtcaatgcgctggattgtttggccgttctg
tgcaacagtggttttttgcggaaaagaatattgattgaaatgatagagcgttcttttcca
ttgctatgttatcctagtcaatgggtaaggaggtcagttgtcactttccttgcatctagc
agtgagtgcttgggagctgtagattcttacgtttttcttgctccagttatacagcctttc
ctacgtcgacaacctgcatctctggactctgaaaaggctcttctttcttgtctgaagcca
ccagtctcaagggaagtattttatgaagtcttacaaaatgctagaagttctgatatgttg
gagagacagagaaagatatggtacaattcatcagcacaatctaaacaatgggaaattgct
gatttactcgagagagggactggggaattagactcaatgaagtattggtctgagaaacaa
cagtctaatggaagtcatagacctattgatagtgtcttgcagcaatcagggctaacagaa
gctgctgatgacgatgccaagctgagagcactggggtgtaatacacgtaatgcttctagt
gcaatcgacatgcatgatccattatgcttagagaagttacagttttcaggcttaacatct
ccgcagctcaatggtttaaatagtttcatgtgtgataaatcgtcagaaggtatacctttg
tactcttttagcatggacaagcgagctacggtagctccttcagcagcttctgatactcct
ttgccttggatggatccaattagtaaatcattcagcctggctagttcagttccaacacct
aagcttgtttcaggctcctttggtataactgccggttctaaacagttctacagagttgtg
catgaaccagaaagtcgggaaaatgatcaaatagccaatgctaatagtaaatttcaagac
atgggattatccggtacagtgaaaggaagttcggttagaatggaagatgcttctacttcg
actgattttaccggactaccctctttttctcggtcttcatcaattccagattcgggttgg
aggcctcgtggggtgttggttgcacacctgcaggagcaccgatctgctgtcaatgatatt
gcagtttcaaatgatcacagtttctttgtgagtgcatctgatgattccactgtcaaagtg
tgggattcaagaaagttggagaaggatatatcatttaggtcgaggctgacttatcacttg
gaaggaagccgagcactatgcactgcaatgctccgaaactctgcccaagttgttgttgga
gcttgcgatgggacaatacatatgttttctgttgatcatatttctaaaggtctaggaaat
gttgttgaaaagtattcaggtatcgctgatataaaaaagaaggatgtgaaggaaggtgca
atacttacccttttgaactaccccatagataactgtggcattcaaacgtttatgtacagc
acccaaaattgtggtattcatctttgggatacaagatcaagttcaaatgcatggacgctg
aaagcaattccagaggaaggctatatatcgtgtctggtagctggcccttgcggcaactgg
tttgtttcagggtcttctaggggtgtgcttaccctttgggatttgaggttccgtattccg
gtgaactcatggcagtattctcttgtatgcccggtagaaaagatgtgtctctttgtccct
ccttcaagtgtctcagtttctacaactgctaggcctcttatttatgttgctgctggctgc
aatgaagtctcactttggaatgcagagaatgggacctgccaccaggtatttagggctgca
aattatgatagtgatgcagaaatgtctgatttaccatgggcattggctaggccatctgct
aaaacaagctctaaatctgatccgaggaggaatgcaaatccaaggtatcgagtggatgaa
ctaaatgaaccacctcctcgtgttccgggtatccgttcattacttcctttacctggtggt
gatctgttgactgggggcactgacttaagaattcgccgctgggaccatttcagccctgat
agaagttactgtatgtgtggcccaaattttaagggagttggaaatgatgatttctatgaa
gcaagatcaagttttggtgcacaagttgtacaggagacaaagagacgacctctaacaaca
aagctgacagcaaaagcagttcttgctgctgctgccactgattctgctggatgccaccat
gattctgtcctctctttggcttcagtgaaattaaaccagagactcttaatctcaagcggt
agagatggcgctattaaggtttggaagtga
DBGET
integrated database retrieval system
