Gossypium hirsutum (upland cotton): 107907237
Help
Entry
107907237 CDS
T04793
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03015
mRNA surveillance pathway
ghi04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107907237
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
107907237
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ghi01009
]
107907237
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107907237
03036 Chromosome and associated proteins [BR:
ghi03036
]
107907237
Protein phosphatases and associated proteins [BR:
ghi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
107907237
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
107907237
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
107907237
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
Ribonuc_red_lgC
DUF6985
Motif
Other DBs
NCBI-GeneID:
107907237
NCBI-ProteinID:
XP_016690007
UniProt:
A0A1U8JMT2
LinkDB
All DBs
Position
A05:complement(2147813..2151071)
Genome browser
AA seq
507 aa
AA seq
DB search
MLKQILSKLPRKSQKSDSLDSAGLDSGNHTSNSSNGVQCTNIGNSITSRLSVVKRVSSAV
FPASIMAGVEAVEPNLSFKDVSNPQKQNLFISKLNLCCEVSDFSDPEKASSEQDLKRQTL
IELVDFVSSGSAKFNEPAVAAMCKMCALNLFRVFPPKYRSNTSSGEAEDDEPIFDPAWSS
LQLVYDLLLRFISYSSLDAKVAKKHVDHSFILKLLDLFESEDPRERDCLKTILHRIYGKF
MVHRPFVRKAVSNIIYRFIFETERHNGIAELLEIFGSIISGFAIPLKEEHKMFLCRALIP
LHKPKSIGVYHQQLTYCVVQFVDKDQKLANNVIKGLLKYWPITNSQKELMFISELEEILE
MTNMVEFQKIMVPVFRRIACCLNSSHYQVAERAHLLWNNEHILNLITHNRHVIFPLIFPS
LEWNSQNHWNQAVLNLTQNIRKMFCEMDEELLLACQRKLEEENSQLIEAAEKRKLAWEHL
ETTAAAFKPAATNNVPPVKPATPLVAC
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgctcaagcaaattctaagcaaactcccacggaagtcgcaaaaatccgattctttagat
tcagctggacttgattctggcaatcatacttcgaactcgagcaatggagttcaatgtacg
aatattgggaatagtataacaagtcgactaagtgttgttaaacgggtgtcatcagctgtt
tttcctgctagtatcatggctggagtggaggcagttgagccgaatctatcattcaaggat
gtttcaaatccgcagaagcagaacttgtttatcagtaaattgaacctgtgttgtgaggtt
tctgatttcagcgatcccgaaaaggcttcttctgagcaagatcttaaacgccaaacattg
atagaacttgtcgattttgtttcttcggggtctgcaaagttcaatgaaccagcagtggct
gcaatgtgtaaaatgtgtgcccttaatctgttcagagtttttccacctaaatatcgctct
aatacctccagcggtgaagcagaagatgacgaaccgatatttgaccctgcctggtccagt
ttgcaacttgtgtatgatctacttcttcggtttatcagctatagttctctcgatgcaaag
gtggcaaaaaagcatgtagatcattcttttattttgaaattacttgaccttttcgagtct
gaggaccctcgggaaagagactgtttgaaaacaattctgcatagaatttacgggaaattc
atggtacacaggccctttgtgagaaaagctgttagcaatatcatctatcgatttattttt
gaaaccgaaaggcataatggtattgctgagctcttagagatttttggaagtattattagt
gggtttgctataccattgaaggaagagcacaagatgttcctgtgtagagctcttataccg
ctacacaaaccaaagtccatcggtgtttatcatcagcaattaacttactgtgttgtacag
tttgtagataaggatcaaaagttagctaataatgtgattaagggactgttaaagtactgg
ccaattactaatagccagaaggaattgatgtttataagcgaattagaagagattttggag
atgactaacatggtcgagttccaaaagatcatggttcccgtgtttcggcgtattgcatgc
tgcctaaatagctcccattaccaggtggccgaacgagctcacttgttgtggaacaacgag
cacatcctcaatctcattacgcataaccgtcacgtgattttccctctcatctttccgtcc
cttgaatggaattcccagaatcattggaatcaagcagtgcttaacctgacacagaacata
agaaagatgttctgcgagatggatgaagagcttctgctcgcctgtcagcgcaagttggag
gaagaaaactcccaattgatcgaagcagctgagaagcggaaactagcgtgggaacacctg
gaaaccactgccgctgctttcaaacctgcagctactaacaatgtccctcctgtaaaacca
gccacaccgcttgtcgcctgttga
DBGET
integrated database retrieval system
