Gossypium hirsutum (upland cotton): 107907252
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Entry
107907252 CDS
T04793
Name
(RefSeq) 26S proteasome regulatory subunit 8 homolog A-like
KO
K03066
26S proteasome regulatory subunit T6
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
107907252
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
ghi03051
]
107907252
Proteasome [BR:
ghi03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
107907252
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Prot_ATP_ID_OB_C
AAA_5
AAA_lid_PRS2_C
AAA_2
AAA_16
nSTAND3
PRS7_OB
AAA_22
RuvB_N
TIP49
AAA_28
AAA_18
NPHP3_N
AAA_3
AAA_14
AAA_33
Mg_chelatase
PhoH
Parvo_NS1
ATPase
ABC_tran
AAA_11
AAA_24
AAA_17
RNA_helicase
IstB_IS21
DUF815
OapC
AAA_19
AAA_7
AAA_25
DUF5906
TsaE
Sigma54_activat
bpMoxR
Zeta_toxin
RsgA_GTPase
DASH_Dad2
DUF4763
Motif
Other DBs
NCBI-GeneID:
107907252
NCBI-ProteinID:
XP_016690030
UniProt:
A0A1U8JIB5
LinkDB
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Position
A05:complement(2024030..2028455)
Genome browser
AA seq
417 aa
AA seq
DB search
MATVDIERKQAASAEEICTAKSGAKQGEGLRQYYIQHIHELQLNLRQKTHNLNRLEAQRN
ELNSQVRMLREELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKNIDITKITP
STRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIK
HPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRM
VRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKI
KVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRFDILKIHSRRMNLMRGIDLKKIAE
KMNGASGAELKAVCTESGMFALRERRVHVTQEDFEMAVAKVMKKESEKNMSLRKLWK
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggtggatatcgagaggaagcaagcggcatcggcggaagagatatgcaccgcc
aagagcggcgccaagcaaggggaagggctccggcaatactatatccaacacatccacgag
cttcagctcaacctccgccaaaaaacccacaatctcaaccgtcttgaagcccaacgcaac
gagctcaattcccaagtgagaatgcttagagaggaactgcagctgcttcaggaacctgga
tcctatgttggcgaggttgtgaaagttatgggtaaaaacaaggtcttagtcaaggttcat
ccagaaggaaaatatgttgtcgatattgataagaatattgatatcacaaaaatcacacca
tccactagagttgctcttcgcaatgacagctatgttctccatctgatcttaccgagcaaa
gtagatcccttggttaatcttatgaaagttgaaaaagtaccagattctacgtatgacatg
attggtggtctcgaccaacaaattaaagagataaaagaggttatagaacttccaattaaa
caccctgaattgtttgaaagtcttggaatagctcagccaaagggcgtcctgttgtatgga
ccaccgggtacaggaaaaactctattggctagagctgtggcccatcatactgattgtact
tttatcagggtttccggttctgagttagttcagaaatacattggagagggctctcgaatg
gttagagaacttttcgttatggccagggagcacgccccatcaatcatatttatggatgag
atagacagcattgggtccgctcgaatggaatctggaagtggcaatggcgacagtgaggta
cagagaacaatgttggagcttctcaaccagcttgatggatttgaagcatctaacaagatc
aaggttctgatggccaccaatcggattgatatcttggatcaagctcttcttaggccagga
cgaattgacaggaagattgaatttccaaatcctaatgaggagtctcgtttcgacatctta
aaaatacattctagaagaatgaatttgatgagagggattgatctaaagaagattgctgag
aagatgaacggtgcttctggtgcagagcttaaggctgtgtgcacagaatcaggaatgttt
gctttgagggaaaggagagtccacgtaacacaagaagattttgagatggcggtggcgaaa
gtaatgaagaaggagagcgagaagaacatgtccttacggaagctatggaagtga
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